name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_300_bf_scaffold_460_curated_1
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3..272
|
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
purU; formyltetrahydrofolate deformylase; K01433 formyltetrahydrofolate deformylase [EC:3.5.1.10]
Formyltetrahydrofolate deformylase n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0Q2R8_9RHIZ
|
|
SCNpilot_cont_300_bf_scaffold_460_curated_2
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
276..500
|
Bifunctional protein FolD n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LZT9_RHITR
bifunctional protein FolD
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
|
|
SCNpilot_cont_300_bf_scaffold_460_curated_3
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1056..1937)
|
AraQ n=1 Tax=Rhizobium leguminosarum RepID=UPI00036640C5
Putative sugar ABC transporter permease protein {ECO:0000313|EMBL:KFC69723.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
ABC transporter permease; K02026 multiple sugar transport system permease protein
|
|
SCNpilot_cont_300_bf_scaffold_460_curated_4
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1934..2827)
|
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000370A4E7
Sugar ABC transporter permease {ECO:0000313|EMBL:KFL32673.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
ABC transporter; K02025 multiple sugar transport system permease protein
|
|
SCNpilot_cont_300_bf_scaffold_460_curated_5
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2893..4152)
|
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00037FB562
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:CDX24631.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
extracellular solute-binding protein
|
|
SCNpilot_cont_300_bf_scaffold_460_curated_6
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4284..7025)
|
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI0003683919
Uncharacterized protein {ECO:0000313|EMBL:KFL28222.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
putative glycosyl hydrolase
|
|
SCNpilot_cont_300_bf_scaffold_460_curated_7
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7212..8207
|
LacI family transcriptional regulator n=1 Tax=Rhizobium leguminosarum RepID=UPI00037849F8
Transcriptional regulator, LacI family {ECO:0000313|EMBL:CDP50039.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
transcriptional regulator LacI family
|
|
SCNpilot_cont_300_bf_scaffold_460_curated_8
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8338..9114)
|
short chain dehydrogenase (EC:1.1.1.100)
short-chain dehydrogenase n=1 Tax=Aureimonas ureilytica RepID=UPI00036E0C92
Uncharacterized protein {ECO:0000313|EMBL:EJC75865.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
|
|
SCNpilot_cont_300_bf_scaffold_460_curated_9
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9124..10272)
|
dgoA; galactonate dehydratase; K01684 galactonate dehydratase [EC:4.2.1.6]
Putative epimerase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U4N3_9RHIZ
Putative epimerase {ECO:0000313|EMBL:ENN87559.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
|
|
SCNpilot_cont_300_bf_scaffold_460_curated_10
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10292..11917)
|
Choline dehydrogenase protein {ECO:0000313|EMBL:AJD44296.1}; EC=1.1.99.1 {ECO:0000313|EMBL:AJD44296.1};; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
sorbose dehydrogenase n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000362A8E4
|
|
SCNpilot_cont_300_bf_scaffold_460_curated_11
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11939..12829)
|
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003638F24
Aldose 1-epimerase
Aldose 1-epimerase {ECO:0000313|EMBL:ACS61001.1}; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;"
|
|
SCNpilot_cont_300_bf_scaffold_460_curated_12
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12838..13842)
|
sugar ABC transporter permease n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003700CEF
Sugar ABC transporter permease protein {ECO:0000313|EMBL:AJD44294.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
inner-membrane translocator; K02057 simple sugar transport system permease protein
|
|
SCNpilot_cont_300_bf_scaffold_460_curated_13
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13854..15383)
|
ABC transporter; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17]
heme ABC transporter ATP-binding protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00035CD53E
ABC transporter {ECO:0000313|EMBL:EPE94217.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
|
|
SCNpilot_cont_300_bf_scaffold_460_curated_14
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15456..16436)
|
sugar ABC transporter substrate-binding protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00037CD16D
periplasmic binding protein/LacI transcriptional regulator; K02058 simple sugar transport system substrate-binding protein
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:ACS61004.1}; Flags: Precursor;; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;"
|
|
SCNpilot_cont_300_bf_scaffold_460_curated_15
unknown
|
Not on your lists |
comp(16451..16630)
|
This feature has no annotations |
|
SCNpilot_cont_300_bf_scaffold_460_curated_16
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16732..17505
|
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00037794C0
GntR family transcriptional regulator {ECO:0000313|EMBL:EPE94219.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
GntR family transcriptional regulator
|
|
SCNpilot_cont_300_bf_scaffold_460_curated_17
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17608..18888)
|
LolC/E family lipoprotein releasing system, transmembrane protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C214_9RHIZ
LolC/E family lipoprotein releasing system, transmembrane protein {ECO:0000313|EMBL:EIM75866.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
LolC/E family lipoprotein releasing system, transmembrane protein; K09808 lipoprotein-releasing system permease protein
|
|
SCNpilot_cont_300_bf_scaffold_460_curated_18
Komagataeibacter xylinus, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19389..19958)
|
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=1296990 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter xylinus E25.;"
hypothetical protein n=1 Tax=Gluconacetobacter europaeus RepID=UPI0002D32D72
phenylacrylic acid decarboxylase
|
|
SCNpilot_cont_300_bf_scaffold_460_curated_19
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19970..21343)
|
4-hydroxybenzoate decarboxylase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LW63_RHITR
3-octaprenyl-4-hydroxybenzoate carboxy-lyase {ECO:0000313|EMBL:KJC56900.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
4-hydroxybenzoate decarboxylase
|
|
SCNpilot_cont_300_bf_scaffold_460_curated_20
uncultured bacterium, Bacteria
|
Not on your lists |
comp(21353..22867)
|
Histidine ammonia-lyase {ECO:0000313|EMBL:EKD61627.1}; EC=4.3.1.3 {ECO:0000313|EMBL:EKD61627.1};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative histidine ammonia-lyase; K01745 histidine ammonia-lyase [EC:4.3.1.3]
Histidine ammonia-lyase n=1 Tax=uncultured bacterium RepID=K2AJ08_9BACT
|
|
SCNpilot_cont_300_bf_scaffold_460_curated_21
Komagataeibacter xylinus, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22961..24208
|
Transcriptional regulator, LysR family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D2H2_9RHIZ
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AHI24033.1}; TaxID=1296990 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter xylinus E25.;"
transcriptional regulator, LysR family
|
|
SCNpilot_cont_300_bf_scaffold_460_curated_22
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24422..26038
|
Alcohol dehydrogenase {ECO:0000313|EMBL:EYR81282.1}; EC=1.1.99.- {ECO:0000313|EMBL:EYR81282.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Alcohol dehydrogenase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EZ64_9RHIZ
GMC family oxidoreductase
|
|
SCNpilot_cont_300_bf_scaffold_460_curated_23
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26072..27574)
|
Transcriptional regulator, GntR family with aminotransferase domain-containing protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F5V3_9RHIZ
Putative rhizopine catabolism regulatory protein MocR {ECO:0000313|EMBL:EYR81283.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
GntR family transcriptional regulator/MocR family aminotransferase
|
|
SCNpilot_cont_300_bf_scaffold_460_curated_24
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27756..28862
|
Mandelate racemase/muconate lactonizing protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWN0_9RHIZ
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:EYR81284.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
racemase
|
|
SCNpilot_cont_300_bf_scaffold_460_curated_25
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28864..30354
|
Aldehyde dehydrogenase {ECO:0000313|EMBL:EYR81285.1}; EC=1.2.99.3 {ECO:0000313|EMBL:EYR81285.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
betaine-aldehyde dehydrogenase (EC:1.2.1.8)
Aldehyde dehydrogenase family protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NXN1_9RHOB
|
|
SCNpilot_cont_300_bf_scaffold_460_curated_26
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30525..31604
|
Spermidine/putrescine-binding periplasmic protein 2 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EXM8_9RHIZ
Spermidine/putrescine-binding periplasmic protein 2 {ECO:0000313|EMBL:EYR81286.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
spermidine/putrescine-binding, periplasmic protein
|
|
SCNpilot_cont_300_bf_scaffold_460_curated_27
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31772..32845
|
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000313|EMBL:EYR81287.1}; EC=3.6.3.31 {ECO:0000313|EMBL:EYR81287.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
spermidine/putrescine transport system, ATP-binding protein (EC:3.6.3.31)
Spermidine/putrescine import ATP-binding protein PotA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CGJ7_9RHIZ
|
|
SCNpilot_cont_300_bf_scaffold_460_curated_28
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32851..33720
|
Spermidine/putrescine transport system permease protein PotB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWM9_9RHIZ
Spermidine/putrescine transport system permease protein PotB {ECO:0000313|EMBL:EYR81288.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
spermidine/putrescine transport system, permease protein
|
|
SCNpilot_cont_300_bf_scaffold_460_curated_29
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
33723..34589
|
ABC-type transporter, integral membrane subunit n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D5I9_9RHIZ
ABC-type spermidine/putrescine transport system permease component II {ECO:0000313|EMBL:EYR81289.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
spermidine/putrescine transport system, permease protein
|
|
SCNpilot_cont_300_bf_scaffold_460_curated_30
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(34836..36152)
|
Aminotransferase class-III n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UXY4_9RHIZ
Aminotransferase class-III {ECO:0000313|EMBL:ENN86525.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
aminotransferase class-III
|