name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_300_bf_scaffold_1193_curated_1
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(384..1697)
|
ABC transporter related n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V2X6_SPHWW
ABC transporter-like protein; K02049 NitT/TauT family transport system ATP-binding protein
ABC transporter related {ECO:0000313|EMBL:ABQ66642.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
|
|
SCNpilot_cont_300_bf_scaffold_1193_curated_2
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1715..3463)
|
sulfonate ABC transporter permease n=1 Tax=Sphingomonas echinoides RepID=UPI00026CB957
binding-protein-dependent transport system inner membrane protein; K02050 NitT/TauT family transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABQ66641.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
|
|
SCNpilot_cont_300_bf_scaffold_1193_curated_3
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4113..5087
|
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00030BE34A
Phosphatase {ECO:0000313|EMBL:AIT07289.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_1193_curated_4
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5332..7188)
|
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
nrdA; ribonucleoside-diphosphate reductase alpha chain (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Ribonucleoside-diphosphate reductase n=1 Tax=Sphingomonas sp. S17 RepID=F3WTL9_9SPHN
|
|
SCNpilot_cont_300_bf_scaffold_1193_curated_5
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7708..10359)
|
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003781313
Sensory box protein {ECO:0000313|EMBL:EZP55551.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
|
|
SCNpilot_cont_300_bf_scaffold_1193_curated_6
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10590..12770
|
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
ribonuclease R n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B412E9
ribonuclease R
|
|
SCNpilot_cont_300_bf_scaffold_1193_curated_7
unknown
|
Not on your lists |
12772..13080
|
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037E0C2E
|
|
SCNpilot_cont_300_bf_scaffold_1193_curated_8
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13112..14275)
|
saccharopine dehydrogenase n=1 Tax=Sphingomonas melonis RepID=UPI00037AB458
Saccharopine dehydrogenase {ECO:0000313|EMBL:KHA64452.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_1193_curated_9
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14332..16125)
|
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036359D5
ABC transporter {ECO:0000313|EMBL:AIT06162.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
lipid ABC transporter ATPase/inner membrane protein
|
|
SCNpilot_cont_300_bf_scaffold_1193_curated_10
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16494..17711
|
polyhydroxyalkanoate depolymerase; K05973 poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
intracellular PHB depolymerase n=1 Tax=Sphingomonas melonis RepID=UPI00036A7B30
Putative polyhydroxyalkanoate depolymerase {ECO:0000313|EMBL:GAM00224.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
|
|
SCNpilot_cont_300_bf_scaffold_1193_curated_11
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18043..19251
|
methionine gamma-lyase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B5DBC7
mdeA; methionine gamma-lyase
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
|
|
SCNpilot_cont_300_bf_scaffold_1193_curated_12
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19301..19756
|
AsnC family transcriptional regulator n=1 Tax=Rhizobium sp. Pop5 RepID=K0VVR2_9RHIZ
AsnC family transcriptional regulator {ECO:0000313|EMBL:EJZ22836.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
AsnC family transcriptional regulator
|
|
SCNpilot_cont_300_bf_scaffold_1193_curated_13
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19884..20645)
|
ABC-2 type transporter family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WTS9_9SPHN
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
hypothetical protein; K01992 ABC-2 type transport system permease protein
|
|
SCNpilot_cont_300_bf_scaffold_1193_curated_14
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20642..21574)
|
multidrug ABC transporter ATP-binding protein n=1 Tax=Sphingomonas melonis RepID=UPI0003622A6B
ABC transporter family protein {ECO:0000313|EMBL:EZP55331.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
ABC transporter; K09687 antibiotic transport system ATP-binding protein
|
|
SCNpilot_cont_300_bf_scaffold_1193_curated_15
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21571..22293)
|
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036F3742
DSBA oxidoreductase {ECO:0000313|EMBL:AIT06170.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
DsbA oxidoreductase
|
|
SCNpilot_cont_300_bf_scaffold_1193_curated_16
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22290..23642)
|
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000376D661
Peptidase M48 {ECO:0000313|EMBL:KHA64385.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
peptidase M48 Ste24p
|
|
SCNpilot_cont_300_bf_scaffold_1193_curated_17
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23887..26457)
|
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035D2F43
Rne/Rng family ribonuclease
|
|
SCNpilot_cont_300_bf_scaffold_1193_curated_18
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26918..28141
|
cell wall hydrolase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037038A8
N-acetylmuramoyl-L-alanine amidase family protein {ECO:0000313|EMBL:EZP55371.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
N-acetylmuramoyl-L-alanine amidase
|
|
SCNpilot_cont_300_bf_scaffold_1193_curated_19
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28189..30705
|
peptidoglycan glycosyltransferase (EC:2.4.1.129); K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-]
penicillin-binding protein n=1 Tax=Sphingomonas melonis RepID=UPI0003770267
Transglycosylase family protein {ECO:0000313|EMBL:EZP55339.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
|
|
SCNpilot_cont_300_bf_scaffold_1193_curated_20
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30829..31956
|
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037AB835
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
peptide chain release factor 2; K02836 peptide chain release factor 2
|
|
SCNpilot_cont_300_bf_scaffold_1193_curated_21
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31953..32750
|
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003690D9B
Methyltransferase domain protein {ECO:0000313|EMBL:EZP55337.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
ubiquinone/menaquinone biosynthesis methyltransferase
|
|
SCNpilot_cont_300_bf_scaffold_1193_curated_22
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(32673..33035)
|
DNA repair protein n=1 Tax=Sphingomonas elodea RepID=UPI0002631A3F
DNA, contig: SP617 {ECO:0000313|EMBL:GAN13350.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
radC; DNA repair protein
|
|
SCNpilot_cont_300_bf_scaffold_1193_curated_23
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
33152..34078
|
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
thymidylate synthase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003760DD5
|
|
SCNpilot_cont_300_bf_scaffold_1193_curated_24
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(34103..34441)
|
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000364F6CB
Sphingomonas taxi strain 30a NODE_17, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29968.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
LysR family transcriptional regulator
|
|
SCNpilot_cont_300_bf_scaffold_1193_curated_25
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
35001..37079
|
Malate synthase G {ECO:0000256|HAMAP-Rule:MF_00641, ECO:0000256|RuleBase:RU003572}; EC=2.3.3.9 {ECO:0000256|HAMAP-Rule:MF_00641, ECO:0000256|RuleBase:RU003572};; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
Malate synthase G n=1 Tax=Sphingobium baderi LL03 RepID=T0G1S8_9SPHN
|
|
SCNpilot_cont_300_bf_scaffold_1193_curated_26
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
37453..37926
|
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
dihydrofolate reductase n=1 Tax=Sphingomonas melonis RepID=UPI000371911B
dihydrofolate reductase
|
|
SCNpilot_cont_300_bf_scaffold_1193_curated_27
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(38371..39609)
|
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035FECB9
|