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SCNpilot_cont_300_bf_scaffold_1445_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1445_curated_1
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

982..1398
DNA (417bp) protein (139aa)
MerR family transcriptional regulator n=1 Tax=Sphingomonas melonis RepID=UPI0003671BC3
DNA, contig: SP670 {ECO:0000313|EMBL:GAN15863.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
MerR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1445_curated_2
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1472..1978)
DNA (507bp) protein (169aa)
fatty acid alpha hydroxylase, cytochrome P450; K15629 fatty-acid peroxygenase [EC:1.11.2.4]
Fatty acid alpha-hydroxylase n=1 Tax=Sphingomonas paucimobilis RepID=O24782_SPHPI
DNA, contig: SP670 {ECO:0000313|EMBL:GAN15864.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
SCNpilot_cont_300_bf_scaffold_1445_curated_3
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2864..3385
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00036BB46B
Sphingomonas taxi strain 30a NODE_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26888.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1445_curated_4
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3438..3821)
DNA (384bp) protein (128aa)
MerR family transcriptional regulator n=2 Tax=Sphingomonas melonis RepID=UPI0003600210
Sphingomonas taxi strain 30a NODE_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26887.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
MerR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1445_curated_5
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3818..6292)
DNA (2475bp) protein (825aa)
heavy metal translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
copper-translocating P-type ATPase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI0002883924
DNA, contig: SP670 {ECO:0000313|EMBL:GAN15867.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
SCNpilot_cont_300_bf_scaffold_1445_curated_6
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6507..7820
DNA (1314bp) protein (438aa)
type II restriction enzyme NmeDIP n=1 Tax=Sphingomonas melonis RepID=UPI000367A04F
Sphingomonas taxi strain 30a NODE_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26885.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1445_curated_7
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7885..8769
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00035E1666
DNA, contig: SP670 {ECO:0000313|EMBL:GAN15869.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1445_curated_8
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8859..9191
DNA (333bp) protein (111aa)
ferredoxin n=1 Tax=Sphingomonas melonis RepID=UPI0003700C3F
DNA, contig: SP670 {ECO:0000313|EMBL:GAN15870.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1445_curated_9
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9237..9506)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI0003608B72
Sphingomonas taxi strain 30a NODE_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26882.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
flagellar biosynthetic protein FliQ; K02420 flagellar biosynthetic protein FliQ
SCNpilot_cont_300_bf_scaffold_1445_curated_10
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9559..10485)
DNA (927bp) protein (309aa)
copper resistance protein CopD n=1 Tax=Sphingomonas melonis RepID=UPI00037FBAB3
Sphingomonas taxi strain 30a NODE_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26881.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
copper resistance D; K07245 putative copper resistance protein D
SCNpilot_cont_300_bf_scaffold_1445_curated_11
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10490..10816)
DNA (327bp) protein (109aa)
copper resistance protein CopC n=1 Tax=Sphingomonas melonis RepID=UPI0003612B74
Sphingomonas taxi strain 30a NODE_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26880.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
copC; copc copper resistance protein; K07156
SCNpilot_cont_300_bf_scaffold_1445_curated_12
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10986..11255
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000378B8DA
Sphingomonas taxi strain 30a NODE_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26879.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_300_bf_scaffold_1445_curated_13
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11252..11692
DNA (441bp) protein (147aa)
heavy metal resistance protein n=1 Tax=Sphingomonas melonis RepID=UPI00036BBA9B
DNA, contig: SP670 {ECO:0000313|EMBL:GAN15875.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
heavy metal resistance protein
SCNpilot_cont_300_bf_scaffold_1445_curated_14
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11703..12272
DNA (570bp) protein (190aa)
FecI sigma-24 factor n=1 Tax=Sphingomonas melonis RepID=UPI0003607BB7
Sphingomonas taxi strain 30a NODE_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26877.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_cont_300_bf_scaffold_1445_curated_15
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12340..14373
DNA (2034bp) protein (678aa)
copper-binding protein n=1 Tax=Sphingomonas melonis RepID=UPI000370C90D
Sphingomonas taxi strain 30a NODE_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26876.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
putative multicopper oxidase
SCNpilot_cont_300_bf_scaffold_1445_curated_16
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15179..15586
DNA (408bp) protein (136aa)
hypothetical protein n=2 Tax=Sphingomonas melonis RepID=UPI000374E1EA
CopB protein {ECO:0000313|EMBL:GAN15878.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
copper resistance B; K07233 copper resistance protein B
Displaying 16 items

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