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SCNpilot_cont_300_bf_scaffold_854_curated

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Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_854_curated_1
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

143..487
DNA (345bp) protein (115aa)
Protein tyrosine/serine phosphatase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5U2_NOVAD
Protein tyrosine/serine phosphatase {ECO:0000313|EMBL:KHS49225.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
protein tyrosine/serine phosphatase
SCNpilot_cont_300_bf_scaffold_854_curated_2
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(592..1905)
DNA (1314bp) protein (438aa)
manganese transporter n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5DC50
Divalent metal cation transporter MntH {ECO:0000256|HAMAP-Rule:MF_00221}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
Mn2+/Fe2+ transporter; K03322 manganese transport protein
SCNpilot_cont_300_bf_scaffold_854_curated_3
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2107..2529
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B372BE
Uncharacterized protein {ECO:0000313|EMBL:EQB31667.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_854_curated_4
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2590..3219)
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000360CBA8
Sphingomonas taxi strain 30a NODE_33, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29748.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
HhH-GPD family protein
SCNpilot_cont_300_bf_scaffold_854_curated_5
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3286..3603
DNA (318bp) protein (106aa)
ferredoxin n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA5EE
Ferredoxin {ECO:0000313|EMBL:AJP73041.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
ferredoxin; K04755 ferredoxin, 2Fe-2S
SCNpilot_cont_300_bf_scaffold_854_curated_6
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3877..4623)
DNA (747bp) protein (249aa)
RNA methyltransferase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
RNA 2'-O ribose methyltransferase substrate binding family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WZB5_9SPHN
RNA methyltransferase {ECO:0000313|EMBL:AJP73040.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCNpilot_cont_300_bf_scaffold_854_curated_7
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4917..6053)
DNA (1137bp) protein (379aa)
epoxide hydrolase 1 (EC:3.3.2.9)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI00035D4856
Epoxide hydrolase {ECO:0000313|EMBL:KHK89795.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
SCNpilot_cont_300_bf_scaffold_854_curated_8
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6476..7753
DNA (1278bp) protein (426aa)
Putative membrane protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WZB8_9SPHN
DNA, contig: SP601 {ECO:0000313|EMBL:GAN11973.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
putative protein-S-isoprenylcysteine methyltransferase
SCNpilot_cont_300_bf_scaffold_854_curated_9
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7750..9123)
DNA (1374bp) protein (458aa)
glutamate/cysteine ligase (EC:6.3.2.2); K01919 glutamate--cysteine ligase [EC:6.3.2.2]
glutamate--cysteine ligase n=1 Tax=Sphingomonas melonis RepID=UPI00036C8444
Glutamate--cysteine ligase {ECO:0000313|EMBL:AIT05586.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_300_bf_scaffold_854_curated_10
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9249..9983)
DNA (735bp) protein (245aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
16S rRNA methyltransferase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B7760B
16S ribosomal RNA methyltransferase RsmE
SCNpilot_cont_300_bf_scaffold_854_curated_11
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10141..10554)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B76BB1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH48421.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_cont_300_bf_scaffold_854_curated_12
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10764..11687
DNA (924bp) protein (308aa)
4-hydroxybenzoate octaprenyltransferase {ECO:0000256|SAAS:SAAS00188627}; EC=2.5.1.- {ECO:0000256|SAAS:SAAS00188633};; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
ubiA; 4-hydroxybenzoate octaprenyltransferase; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-]
4-hydroxybenzoate polyprenyltransferase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CD7C0
SCNpilot_cont_300_bf_scaffold_854_curated_13
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11699..12199)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CPS2_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:EXS69695.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_854_curated_14
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12354..13739
DNA (1386bp) protein (462aa)
hypothetical protein n=1 Tax=Blastomonas sp. AAP53 RepID=UPI00030B2A68
Uncharacterized protein {ECO:0000313|EMBL:ESZ85616.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp. CACIA14H2.;"
creD; inner membrane protein; K06143 inner membrane protein
SCNpilot_cont_300_bf_scaffold_854_curated_15
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13754..14536
DNA (783bp) protein (261aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
sdhB; succinate dehydrogenase iron-sulfur subunit (EC:1.3.5.1); K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1]
succinate dehydrogenase iron-sulfur subunit n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000365D16D
SCNpilot_cont_300_bf_scaffold_854_curated_16
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14556..15017
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036D24DD
Uncharacterized protein {ECO:0000313|EMBL:KHA63266.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
phenylacetic acid degradation-like protein
SCNpilot_cont_300_bf_scaffold_854_curated_17
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15148..16239
DNA (1092bp) protein (364aa)
AFG1 family ATPase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037CA038
Sphingomonas taxi strain 30a NODE_40, whole genome shotgun sequence {ECO:0000313|EMBL:KIU30384.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
AFG1 family ATPase
SCNpilot_cont_300_bf_scaffold_854_curated_18
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16740..17444
DNA (705bp) protein (235aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904};; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
malate dehydrogenase (EC:1.1.1.37)
Malate dehydrogenase n=1 Tax=Sphingomonas sp. S17 RepID=F3X3J7_9SPHN
SCNpilot_cont_300_bf_scaffold_854_curated_19
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17591..17881
DNA (291bp) protein (97aa)
GIY-YIG nuclease n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000288387A
Endonuclease {ECO:0000313|EMBL:AIT05625.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
excinuclease ABC subunit C; K07461 putative endonuclease
SCNpilot_cont_300_bf_scaffold_854_curated_20
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17956..18846
DNA (891bp) protein (297aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
succinyl-CoA synthetase subsunit alpha n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B4C033
succinyl-CoA synthetase subunit alpha
SCNpilot_cont_300_bf_scaffold_854_curated_21
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(18785..20197)
DNA (1413bp) protein (471aa)
Putative uncharacterized protein n=1 Tax=Rhizobium etli CNPAF512 RepID=F2AHF8_RHIET
Uncharacterized protein {ECO:0000313|EMBL:KIY11965.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
SCNpilot_cont_300_bf_scaffold_854_curated_22
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20357..21835
DNA (1479bp) protein (493aa)
SucA protein {ECO:0000313|EMBL:KIU29760.1}; EC=1.2.4.2 {ECO:0000313|EMBL:KIU29760.1};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
sucA; 2-oxoglutarate dehydrogenase E1; K00164 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
MFS transporter n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037EFEBA
SCNpilot_cont_300_bf_scaffold_854_curated_23
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21884..23092
DNA (1209bp) protein (403aa)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex {ECO:0000256|RuleBase:RU361138}; EC=2.3.1.61 {ECO:0000256|RuleBase:RU361138};; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase; K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
dihydrolipoamide succinyltransferase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B78AF7
SCNpilot_cont_300_bf_scaffold_854_curated_24
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23192..23731)
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00037C32F2
Uncharacterized protein {ECO:0000313|EMBL:KKC26739.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_854_curated_25
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23800..24465)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CD1B5
Sphingomonas taxi strain 30a NODE_25, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28142.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_300_bf_scaffold_854_curated_26
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24435..25673)
DNA (1239bp) protein (413aa)
glycosyl transferase family 1 n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000371CF40
Glycosyl transferase family 1 {ECO:0000313|EMBL:AIT08060.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
group 1 glycosyl transferase
SCNpilot_cont_300_bf_scaffold_854_curated_27
unknown

Not on your lists

25766..25906
DNA (141bp) protein (47aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037592F1
SCNpilot_cont_300_bf_scaffold_854_curated_28
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25899..27248
DNA (1350bp) protein (450aa)
polymerase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000289F25B
Polymerase {ECO:0000313|EMBL:KHA64505.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_854_curated_29
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27436..28605
DNA (1170bp) protein (390aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003794B25
Mechanosensitive ion channel protein MscS {ECO:0000313|EMBL:KHA64500.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
putative mechanosensitive ion channel
SCNpilot_cont_300_bf_scaffold_854_curated_30
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28771..29205
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037B7BFC
Nodulation protein NodN {ECO:0000313|EMBL:KHA64501.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
MaoC domain-containing protein
Displaying items 1-30 of 54 in total

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