name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_300_bf_scaffold_1427_curated_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(98..1114)
|
VacJ-like lipoprotein n=2 Tax=Novosphingobium nitrogenifigens RepID=F1Z7H9_9SPHN
VacJ lipoprotein {ECO:0000313|EMBL:GAO55500.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
vacJ; surface lipoprotein; K04754 lipoprotein
|
|
SCNpilot_cont_300_bf_scaffold_1427_curated_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1111..1704)
|
Hopanoid biosynthesis associated membrane protein HpnM n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7H8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO55499.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Hopanoid biosynthesis associated membrane protein HpnM
|
|
SCNpilot_cont_300_bf_scaffold_1427_curated_3
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1875..2840
|
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hydroxymethylbutenyl pyrophosphate reductase (EC:1.17.1.2); K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2]
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7H6_9SPHN
|
|
SCNpilot_cont_300_bf_scaffold_1427_curated_4
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2851..3996
|
radical SAM protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA105
Uncharacterized protein {ECO:0000313|EMBL:GAO40249.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
Fe-S oxidoreductase
|
|
SCNpilot_cont_300_bf_scaffold_1427_curated_5
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4000..4659)
|
hypothetical protein n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI0003776DB5
Uncharacterized protein {ECO:0000313|EMBL:GAO40250.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hopanoid-associated phosphorylase
|
|
SCNpilot_cont_300_bf_scaffold_1427_curated_6
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4656..6542)
|
Squalene-hopene cyclase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S1C0_9SPHN
Squalene--hopene cyclase {ECO:0000313|EMBL:GAO40251.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
squalene-hopene cyclase
|
|
SCNpilot_cont_300_bf_scaffold_1427_curated_7
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6700..7443)
|
membrane protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002F306F9
glutaredoxin
Glutaredoxin {ECO:0000313|EMBL:ABQ67490.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
|
|
SCNpilot_cont_300_bf_scaffold_1427_curated_8
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7514..7912
|
MerR family transcriptional regulator n=1 Tax=Sphingomonas elodea RepID=UPI0002631AD8
DNA, contig: SP668 {ECO:0000313|EMBL:GAN15830.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
MerR family transcriptional regulator; K08365 MerR family transcriptional regulator, mercuric resistance operon regulatory protein
|
|
SCNpilot_cont_300_bf_scaffold_1427_curated_9
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7919..9106)
|
UPI0003D65C9A related cluster n=1 Tax=unknown RepID=UPI0003D65C9A
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ETI65770.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
acyl-CoA dehydrogenase
|
|
SCNpilot_cont_300_bf_scaffold_1427_curated_10
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9275..9670
|
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI00036E15ED
DoxX family protein; K15977 putative oxidoreductase
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
|
|
SCNpilot_cont_300_bf_scaffold_1427_curated_11
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9610..11163)
|
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B36933
Uncharacterized protein {ECO:0000313|EMBL:KGB56612.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_1427_curated_12
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11252..13642)
|
TonB-denpendent receptor n=1 Tax=Sphingomonas melonis RepID=UPI00037521D0
DNA, contig: SP613 {ECO:0000313|EMBL:GAN12763.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
rbh
|
|
SCNpilot_cont_300_bf_scaffold_1427_curated_13
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria
|
Not on your lists |
13898..16090
|
katG; catalase/peroxidase (EC:1.11.1.21)
Catalase-peroxidase {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451}; Short=CP {ECO:0000256|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451};; Peroxidase/catalase {ECO:0000256|HAMAP-Rule:MF_01961}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
catalase/hydroperoxidase HPI(I) n=1 Tax=Sphingomonas elodea RepID=UPI0002630B15
|
|
SCNpilot_cont_300_bf_scaffold_1427_curated_14
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16142..16528
|
heme biosynthesis protein HemY n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B41991
Heme biosynthesis protein HemY {ECO:0000313|EMBL:EQB31718.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
iron-sulfur cluster assembly accessory protein
|
|
SCNpilot_cont_300_bf_scaffold_1427_curated_15
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16536..17306
|
exodeoxyribonuclease III (xth); K01142 exodeoxyribonuclease III [EC:3.1.11.2]
exodeoxyribonuclease III n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036C6589
Exodeoxyribonuclease III {ECO:0000313|EMBL:AIT06007.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
|
|
SCNpilot_cont_300_bf_scaffold_1427_curated_16
unknown
|
Not on your lists |
17643..17876
|
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036C60D8
|
|
SCNpilot_cont_300_bf_scaffold_1427_curated_17
unknown
|
Not on your lists |
18234..18515
|
This feature has no annotations |
|
SCNpilot_cont_300_bf_scaffold_1427_curated_18
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19158..20234
|
fatty acid desaturase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B2F8F2
Fatty acid desaturase {ECO:0000313|EMBL:AIT06274.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
fatty acid desaturase
|
|
SCNpilot_cont_300_bf_scaffold_1427_curated_19
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20358..21389)
|
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000366D3D9
Permease {ECO:0000313|EMBL:AIT06273.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
permease YjgP/YjgQ family protein
|
|
SCNpilot_cont_300_bf_scaffold_1427_curated_20
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21386..22588)
|
YjgP/YjgQ family permease n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000366CA71
DNA, contig: SP607 {ECO:0000313|EMBL:GAN12328.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
YjgP/YjgQ family permease
|
|
SCNpilot_cont_300_bf_scaffold_1427_curated_21
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23003..24958)
|
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00036C95C4
Kinase {ECO:0000313|EMBL:AIT08079.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
integral membrane sensor hybrid histidine kinase
|
|
SCNpilot_cont_300_bf_scaffold_1427_curated_22
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25100..26359)
|
bioF; 8-amino-7-oxononanoate synthase (EC:2.3.1.47); K00652 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
8-amino-7-oxononanoate synthase n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI0002893467
DNA, contig: SP607 {ECO:0000313|EMBL:GAN12330.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
|
|
SCNpilot_cont_300_bf_scaffold_1427_curated_23
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26361..26603)
|
phosphopantetheine-binding protein n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI00028981A8
Sphingomonas taxi strain 30a NODE_30, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28468.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
acyl carrier protein
|
|
SCNpilot_cont_300_bf_scaffold_1427_curated_24
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26733..27734)
|
type II secretion system protein n=1 Tax=Sphingomonas melonis RepID=UPI00035FA602
Pilus assembly protein TadC {ECO:0000313|EMBL:AJP70924.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
type II secretion system protein
|
|
SCNpilot_cont_300_bf_scaffold_1427_curated_25
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27739..28713)
|
tight adherence protein B n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC3DE
Pilus assembly protein TadB {ECO:0000313|EMBL:KHA63398.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
Flp pilus assembly protein TadB
|
|
SCNpilot_cont_300_bf_scaffold_1427_curated_26
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28771..30066)
|
pilus assembly protein CpaE n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000287F4F0
Flp pilus assembly protein ATPase CpaE {ECO:0000313|EMBL:EZP57362.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
cpaE; Flp pilus assembly protein ATPase CpaE; K02282 pilus assembly protein CpaE
|
|
SCNpilot_cont_300_bf_scaffold_1427_curated_27
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30068..30736)
|
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000288631D
Pilus assembly protein CpaD {ECO:0000313|EMBL:AIT08026.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
|