name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_300_bf_scaffold_197_curated_1
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(484..1407)
|
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0IQ41_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAM99780.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_197_curated_2
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1475..2626)
|
hypothetical protein n=1 Tax=Pseudomonas sp. 45MFCol3.1 RepID=UPI0003807584
Strain MEJ086 contig_13, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ03285.1}; TaxID=47880 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fulva.;"
2-methylthioadenine synthetase
|
|
SCNpilot_cont_300_bf_scaffold_197_curated_3
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2721..3173)
|
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000367B276
Uncharacterized protein {ECO:0000313|EMBL:EKS31070.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_197_curated_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3176..4363)
|
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0003815971
Uncharacterized protein {ECO:0000313|EMBL:EYR79812.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_197_curated_5
Mesorhizobium sp. LNJC405B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4521..5468
|
UPI0003CDE2F7 related cluster n=1 Tax=unknown RepID=UPI0003CDE2F7
Uncharacterized protein {ECO:0000313|EMBL:ESY01468.1}; TaxID=1287281 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC405B00.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_197_curated_6
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6073..7773)
|
Hemolysin activation/secretion protein n=1 Tax=Sphingobium sp. AP49 RepID=J2CNB2_9SPHN
Hemolysin activation/secretion protein {ECO:0000313|EMBL:EJK78414.1}; Flags: Precursor;; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
surface antigen (D15)
|
|
SCNpilot_cont_300_bf_scaffold_197_curated_7
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7773..8801)
|
Uncharacterized protein (Fragment) n=1 Tax=Sphingobium sp. AP49 RepID=J2W748_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJK78415.1}; Flags: Precursor; Fragment;; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
filamentous hemagglutinin family outer membrane protein
|
|
SCNpilot_cont_300_bf_scaffold_197_curated_8
unknown
|
Not on your lists |
8874..9233
|
This feature has no annotations |
|
SCNpilot_cont_300_bf_scaffold_197_curated_9
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9901..10446
|
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00036E0147
RNA polymerase sigma factor {ECO:0000313|EMBL:KGB56848.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
|
|
SCNpilot_cont_300_bf_scaffold_197_curated_10
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10552..12291
|
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000376CB53
Magnesium chelatase subunit D {ECO:0000313|EMBL:KGB56847.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
hypothetical protein; K07114 uncharacterized protein
|
|
SCNpilot_cont_300_bf_scaffold_197_curated_11
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12464..13615
|
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000362B42E
Uncharacterized protein {ECO:0000313|EMBL:AJA08125.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_197_curated_12
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13673..14797)
|
NADH oxidase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00030EFAD0
Scaffold5, whole genome shotgun sequence {ECO:0000313|EMBL:KIS32264.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
NADPH:quinone reductase
|
|
SCNpilot_cont_300_bf_scaffold_197_curated_13
unknown
|
Not on your lists |
15020..15187
|
This feature has no annotations |
|
SCNpilot_cont_300_bf_scaffold_197_curated_14
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15338..18331)
|
TonB-dependent receptor, partial n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC3AF
TonB-dependent receptor {ECO:0000313|EMBL:AJA08098.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
fepA_1; TonB dependent receptor for iron chelates
|
|
SCNpilot_cont_300_bf_scaffold_197_curated_15
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18425..19372)
|
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003671CA8
Uncharacterized protein {ECO:0000313|EMBL:AJA08099.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
FecR family protein
|
|
SCNpilot_cont_300_bf_scaffold_197_curated_16
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19369..19905)
|
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000365AC71
Uncharacterized protein {ECO:0000313|EMBL:AJA08100.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
|
|
SCNpilot_cont_300_bf_scaffold_197_curated_17
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20093..20974
|
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003764C44
Uncharacterized protein {ECO:0000313|EMBL:AJA08101.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_197_curated_18
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21071..21832
|
Nucleoside triphosphate hydrolase {ECO:0000313|EMBL:AJP71644.1}; EC=3.6.1.19 {ECO:0000313|EMBL:AJP71644.1};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
MazG family protein; K04765 ATP diphosphatase [EC:3.6.1.8]
nucleotide pyrophosphohydrolase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00030F7FF1
|
|
SCNpilot_cont_300_bf_scaffold_197_curated_19
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21832..22128
|
YCII-related domain-containing protein n=1 Tax=Acidovorax sp. CF316 RepID=J1ENL5_9BURK
YCII-related domain-containing protein {ECO:0000313|EMBL:EJE53769.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_197_curated_20
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22133..23422)
|
GTPase HflX n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002E7CB94
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900, ECO:0000313|EMBL:AJP71643.1}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
HSR1-like GTP-binding protein
|
|
SCNpilot_cont_300_bf_scaffold_197_curated_21
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23435..23920)
|
RNA-binding protein Hfq n=1 Tax=Sphingomonas elodea RepID=UPI00026310BC
RNA-binding protein Hfq {ECO:0000256|SAAS:SAAS00067493, ECO:0000313|EMBL:AJP71642.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hfq; RNA-binding protein Hfq; K03666 host factor-I protein
|
|
SCNpilot_cont_300_bf_scaffold_197_curated_22
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24221..24538
|
membrane protein n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262BD8E
Cation/cationic drug transporter {ECO:0000313|EMBL:KEZ20830.1}; Multidrug transporter {ECO:0000313|EMBL:KFD25895.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
small multidrug resistance protein; K11741 quaternary ammonium compound-resistance protein SugE
|
|
SCNpilot_cont_300_bf_scaffold_197_curated_23
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24602..25981)
|
ATPase AAA n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00030AABC3
ATPase AAA {ECO:0000313|EMBL:AJP71641.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
two component sigma-54 specific Fis family transcriptional regulator
|
|
SCNpilot_cont_300_bf_scaffold_197_curated_24
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25978..28233)
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
ATPase n=1 Tax=Sphingomonas elodea RepID=UPI00026310BA
multi-sensor signal transduction histidine kinase
|
|
SCNpilot_cont_300_bf_scaffold_197_curated_25
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28294..29739)
|
chemotaxis protein CheY n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002E139D3
Chemotaxis protein CheY {ECO:0000313|EMBL:AJP71640.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
Fis family nitrogen metabolism transcriptional regulator NtrC; K07712 two-component system, NtrC family, nitrogen regulation response regulator GlnG
|
|
SCNpilot_cont_300_bf_scaffold_197_curated_26
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29736..30833)
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:AJP71639.1}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
nitrogen-specific signal transduction histidine kinase NtrB (EC:2.7.3.-); K07708 two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
histidine kinase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002D670F6
|
|
SCNpilot_cont_300_bf_scaffold_197_curated_27
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30809..31807)
|
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621, ECO:0000313|EMBL:AJP71638.1}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
tRNA-dihydrouridine synthase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00031DF82D
dihydrouridine synthase TIM-barrel protein nifR3
|
|
SCNpilot_cont_300_bf_scaffold_197_curated_28
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32053..33177
|
ispDF; bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein (EC:4.6.1.12)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002F22422
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
|
|
SCNpilot_cont_300_bf_scaffold_197_curated_29
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
33317..33862
|
competence protein n=1 Tax=Sphingomonas elodea RepID=UPI0002631730
Competence protein {ECO:0000313|EMBL:AJP71636.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
CinA domain-containing protein; K03743
|
|
SCNpilot_cont_300_bf_scaffold_197_curated_30
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(33778..34284)
|
cyclase n=1 Tax=Sphingomonas elodea RepID=UPI0002631731
Cyclase {ECO:0000313|EMBL:AJP71635.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
putative oligoketide cyclase
|