name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_300_bf_scaffold_230_curated_1
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(106..576)
|
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002E95CED
Uncharacterized protein {ECO:0000313|EMBL:AJP72462.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_230_curated_2
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(592..849)
|
glutaredoxin n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002D462B2
Glutaredoxin {ECO:0000313|EMBL:AJP72464.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
glutaredoxin 3; K03676 glutaredoxin 3
|
|
SCNpilot_cont_300_bf_scaffold_230_curated_3
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(884..1630)
|
amidophosphoribosyltransferase n=1 Tax=Sphingomonas elodea RepID=UPI0002632136
Amidophosphoribosyltransferase {ECO:0000313|EMBL:AJP72465.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
putative amidophosphoribosyltransferase
|
|
SCNpilot_cont_300_bf_scaffold_230_curated_4
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1673..2518
|
methyltransferase type 11 n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00030FC192
Methyltransferase type 11 {ECO:0000313|EMBL:AJP72466.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
type 11 methyltransferase
|
|
SCNpilot_cont_300_bf_scaffold_230_curated_5
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2745..4268
|
Oxygenase (Tetracycline 6-hydroxylase) protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9J8T4_AGRRK
FAD-dependent oxidoreductase {ECO:0000313|EMBL:KJC60636.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
oxygenase (tetracycline 6-hydroxylase) protein
|
|
SCNpilot_cont_300_bf_scaffold_230_curated_6
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4265..4699)
|
mutT; CTP pyrophosphohydrolase (EC:3.6.1.-); K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-]
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037DE8A2
NTP pyrophosphohydrolase {ECO:0000313|EMBL:AJP74488.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
|
|
SCNpilot_cont_300_bf_scaffold_230_curated_7
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4761..4949
|
pilus assembly protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CAB46
Pilus assembly protein {ECO:0000313|EMBL:AJP72467.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
|
|
SCNpilot_cont_300_bf_scaffold_230_curated_8
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5081..5248
|
pilus assembly protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CACA3
Pilus assembly protein {ECO:0000313|EMBL:AJP72468.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
Flp/Fap pilin component; K02651 pilus assembly protein Flp/PilA
|
|
SCNpilot_cont_300_bf_scaffold_230_curated_9
unknown
|
Not on your lists |
5663..5815
|
This feature has no annotations |
|
SCNpilot_cont_300_bf_scaffold_230_curated_10
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5818..6765)
|
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomon
acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2); K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2]
acetyl-CoA carboxylase subunit alpha n=1 Tax=Sphingomonas elodea RepID=UPI000263213D
|
|
SCNpilot_cont_300_bf_scaffold_230_curated_11
unknown
|
Not on your lists |
comp(6838..6963)
|
This feature has no annotations |
|
SCNpilot_cont_300_bf_scaffold_230_curated_12
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6963..7871)
|
tyrosine recombinase XerD n=1 Tax=Sphingomonas elodea RepID=UPI000263213E
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
phage integrase family protein
|
|
SCNpilot_cont_300_bf_scaffold_230_curated_13
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7868..9685)
|
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000311B5B1
Uncharacterized protein {ECO:0000313|EMBL:AJP74489.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_230_curated_14
unknown
|
Not on your lists |
comp(9666..9803)
|
This feature has no annotations |
|
SCNpilot_cont_300_bf_scaffold_230_curated_15
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9879..10418
|
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109, ECO:0000313|EMBL:AJP72471.1}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
shikimate kinase n=1 Tax=Sphingomonas elodea RepID=UPI0002632141
shikimate kinase
|
|
SCNpilot_cont_300_bf_scaffold_230_curated_16
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10415..11503
|
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
3-dehydroquinate synthase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CB156
|
|
SCNpilot_cont_300_bf_scaffold_230_curated_17
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11507..13441)
|
TonB-dependent receptor n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R7X1_PHEZH
Uncharacterized protein {ECO:0000313|EMBL:AJP70772.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
|
|
SCNpilot_cont_300_bf_scaffold_230_curated_18
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13575..14423
|
Response regulator receiver protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y269_9PROT
Uncharacterized protein {ECO:0000313|EMBL:AJP70773.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
LytTR family two component transcriptional regulator
|
|
SCNpilot_cont_300_bf_scaffold_230_curated_19
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14527..16542
|
histidine kinase n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000373E466
Histidine kinase {ECO:0000313|EMBL:KFD27456.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
signal transduction histidine kinase
|
|
SCNpilot_cont_300_bf_scaffold_230_curated_20
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16613..18487
|
aminopeptidase (EC:3.4.11.2)
peptidase M1 n=1 Tax=Sphingomonas elodea RepID=UPI0002632144
Aminopeptidase {ECO:0000313|EMBL:AJP72477.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
|
|
SCNpilot_cont_300_bf_scaffold_230_curated_21
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18640..19227)
|
Ribosomal protein L11 methyltransferase n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H0C5_CAUCN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAK24555.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
|
|
SCNpilot_cont_300_bf_scaffold_230_curated_22
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19274..19915)
|
Protein TonB n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRQ2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AHE57304.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
tonB; protein TonB; K03832 periplasmic protein TonB
|
|
SCNpilot_cont_300_bf_scaffold_230_curated_23
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19915..20250)
|
membrane protein n=1 Tax=Sphingomonas RepID=UPI000288D6FA
Membrane protein {ECO:0000313|EMBL:AIT05328.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_230_curated_24
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20247..20519)
|
diacylglycerol kinase; K00901 diacylglycerol kinase [EC:2.7.1.107]
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI000365DC44
Diacylglycerol kinase {ECO:0000313|EMBL:GAO35505.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
|
|
SCNpilot_cont_300_bf_scaffold_230_curated_25
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20620..22404)
|
sodium/hydrogen exchanger n=1 Tax=Sphingomonas elodea RepID=UPI0002632148
Sodium:proton exchanger {ECO:0000313|EMBL:AJP72479.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
sodium/hydrogen exchanger; K03455 monovalent cation:H+ antiporter-2, CPA2 family
|
|
SCNpilot_cont_300_bf_scaffold_230_curated_26
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22404..22829)
|
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002D76C0F
Nitrogen-fixing protein NifU {ECO:0000313|EMBL:AJP72480.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
NifU-like protein
|
|
SCNpilot_cont_300_bf_scaffold_230_curated_27
unknown
|
Not on your lists |
comp(22895..23371)
|
This feature has no annotations |
|
SCNpilot_cont_300_bf_scaffold_230_curated_28
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23368..23928)
|
colicin V production protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CB15C
Colicin V production protein {ECO:0000313|EMBL:AJP72482.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
colicin V production protein; K03558 membrane protein required for colicin V production
|
|
SCNpilot_cont_300_bf_scaffold_230_curated_29
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23992..24555)
|
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003783A12
Putative outer membrane lipoprotein Blc {ECO:0000313|EMBL:EIM96526.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia terrae BS001.;"
Lipocalin family protein; K03098 outer membrane lipoprotein Blc
|
|
SCNpilot_cont_300_bf_scaffold_230_curated_30
unknown
|
Not on your lists |
comp(24597..25148)
|
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CCF7A
|