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SCNpilot_cont_300_bf_scaffold_301_curated

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Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_301_curated_1
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(196..1713)
DNA (1518bp) protein (506aa)
asparagine synthase; K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
Asparagine synthase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IM61_9SPHN
Asparagine synthase {ECO:0000313|EMBL:CCA92513.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
SCNpilot_cont_300_bf_scaffold_301_curated_2
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1929..2609)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00036A0065
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA92512.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
SCNpilot_cont_300_bf_scaffold_301_curated_3
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2678..2818)
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0IY44_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB16795.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
SCNpilot_cont_300_bf_scaffold_301_curated_4
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3005..3622)
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037FCC69
Uncharacterized protein {ECO:0000313|EMBL:AJA07216.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
GntR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_301_curated_5
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3619..4038)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0J4A6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EXS69376.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_301_curated_6
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5226..5990
DNA (765bp) protein (255aa)
putative protein-disulfide isomerase; K03981 thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI0003699378
Uncharacterized protein {ECO:0000313|EMBL:AHE53688.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
SCNpilot_cont_300_bf_scaffold_301_curated_7
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6168..6485
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI0003736A9D
Conserved Putative secreted protein {ECO:0000313|EMBL:AJA07211.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_301_curated_8
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6594..6860
DNA (267bp) protein (89aa)
Membrane protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0J4A2_9SPHN
Membrane protein {ECO:0000313|EMBL:EQB16789.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_301_curated_9
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6866..7501
DNA (636bp) protein (212aa)
sex pilus assembly and synthesis protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI0003778824
Conjugal transfer protein {ECO:0000313|EMBL:EXS69370.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
putative sex pilus assembly and synthesis protein; K12067 conjugal transfer pilus assembly protein TraE
SCNpilot_cont_300_bf_scaffold_301_curated_10
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7485..8279
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HUK2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AJA07208.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_301_curated_11
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8276..9580
DNA (1305bp) protein (435aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000365B67A
Conjugal transfer protein TraB {ECO:0000313|EMBL:AJA07207.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
conjugal transfer protein TraB; K12065 conjugal transfer pilus assembly protein TraB
SCNpilot_cont_300_bf_scaffold_301_curated_12
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9616..10278
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S0X3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AHE53682.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_301_curated_13
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10275..12773
DNA (2499bp) protein (833aa)
Sex pilus assembly protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HUJ6_9SPHN
Sex pilus assembly protein {ECO:0000313|EMBL:AHE53681.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
sex pilus assembly protein; K12063 conjugal transfer ATP-binding protein TraC
SCNpilot_cont_300_bf_scaffold_301_curated_14
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12779..13105
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI0003745A82
Putative membrane protein {ECO:0000313|EMBL:AJA07204.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_301_curated_15
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13102..13335
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI0003644DDB
Uncharacterized protein {ECO:0000313|EMBL:AHE53679.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_301_curated_16
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13325..14011
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S0B7_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH49435.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_cont_300_bf_scaffold_301_curated_17
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14008..15024
DNA (1017bp) protein (339aa)
Conjugal DNA transfer protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S0Z1_9SPHN
conjugal DNA transfer protein
Conjugal transfer protein {ECO:0000313|EMBL:AHE53677.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
SCNpilot_cont_300_bf_scaffold_301_curated_18
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15180..17132
DNA (1953bp) protein (651aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0IY21_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AJA07200.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_301_curated_19
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17129..18253
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000378AE07
Mating pair stabilization protein TraN {ECO:0000313|EMBL:AJA07199.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
mating pair stabilization protein TraN
SCNpilot_cont_300_bf_scaffold_301_curated_20
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18501..19106
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HXF0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AHE53674.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_301_curated_21
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19078..19683
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037A7033
Uncharacterized protein {ECO:0000313|EMBL:EQB16772.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
type IV secretory protease
SCNpilot_cont_300_bf_scaffold_301_curated_22
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19866..20573
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00036977D3
Thioredoxin-related protein {ECO:0000313|EMBL:AJA07194.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
thioredoxin-like protein
SCNpilot_cont_300_bf_scaffold_301_curated_23
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20573..21148
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037BCB62
Uncharacterized protein {ECO:0000313|EMBL:AHE53669.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_301_curated_24
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21202..22626
DNA (1425bp) protein (475aa)
conjugal transfer protein TraH n=1 Tax=Sphingomonas melonis RepID=UPI00035FED30
Sex pilus assembly protein TraH {ECO:0000313|EMBL:AJA07192.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
sex pilus assembly protein TraH
SCNpilot_cont_300_bf_scaffold_301_curated_25
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22638..26402
DNA (3765bp) protein (1255aa)
DNA transfer protein n=1 Tax=Sphingomonas melonis RepID=UPI00036413C7
DNA transfer and F pilus assembly protein TraG
DNA transfer and F pilus assembly protein TraG {ECO:0000313|EMBL:AGH49444.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_cont_300_bf_scaffold_301_curated_26
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26399..26746)
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000372C62F
Uncharacterized protein {ECO:0000313|EMBL:EQB15952.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_301_curated_27
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26916..27239)
DNA (324bp) protein (108aa)
XRE family transcriptional regulator n=1 Tax=Lamprocystis purpurea RepID=UPI0003708479
Uncharacterized protein {ECO:0000313|EMBL:KGC03974.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_301_curated_28
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27241..27558)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) RepID=C5B6N4_METEA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS44116.1}; TaxID=272630 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1).;"
SCNpilot_cont_300_bf_scaffold_301_curated_29
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27696..28157
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S101_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH49446.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_cont_300_bf_scaffold_301_curated_30
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28176..28724
DNA (549bp) protein (183aa)
RES domain-containing protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2HC42_9SPHN
RES domain-containing protein {ECO:0000313|EMBL:EJL33108.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
hypothetical protein
Displaying items 1-30 of 77 in total

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