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SCNpilot_cont_300_bf_scaffold_306_curated

Search features with annotation key words

Displaying items 1-30 of 105 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_306_curated_1
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1..666
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035D2563
Uncharacterized protein {ECO:0000313|EMBL:AKD56883.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
Ig family protein
SCNpilot_cont_300_bf_scaffold_306_curated_2
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

885..1634
DNA (750bp) protein (250aa)
transporter n=1 Tax=Spirosoma panaciterrae RepID=UPI00037CFDAF
FeS assembly ATPase SufC; K09013 Fe-S cluster assembly ATP-binding protein
FeS assembly ATPase SufC {ECO:0000313|EMBL:ADB36240.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_306_curated_3
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1737..3062
DNA (1326bp) protein (442aa)
FeS assembly protein SufD n=1 Tax=Spirosoma panaciterrae RepID=UPI00035E6431
FeS assembly protein SufD; K09015 Fe-S cluster assembly protein SufD
FeS assembly protein SufD {ECO:0000313|EMBL:ADB36239.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_306_curated_4
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3406..4269
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037C12C3
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:AEI51764.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCNpilot_cont_300_bf_scaffold_306_curated_5
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4299..5606
DNA (1308bp) protein (436aa)
hydantoinase/carbamoylase family amidase (EC:3.5.1.87); K06016 N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.87]
Amidase, hydantoinase/carbamoylase family {ECO:0000313|EMBL:ADB41086.1}; EC=3.5.1.87 {ECO:0000313|EMBL:ADB41086.1};; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000381EB5D
SCNpilot_cont_300_bf_scaffold_306_curated_6
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5638..6534
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036F2B6D
Uncharacterized protein {ECO:0000313|EMBL:AKD56886.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_306_curated_7
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6645..8078)
DNA (1434bp) protein (478aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037CEF5A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI48629.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCNpilot_cont_300_bf_scaffold_306_curated_8
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8279..9517
DNA (1239bp) protein (413aa)
cysteine desulfurase; K11717 cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
Cysteine desulfurase {ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|SAAS:SAAS00062216};; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
cysteine desulfurase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036611E2
SCNpilot_cont_300_bf_scaffold_306_curated_9
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9539..9766
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K8K6_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH00459.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_cont_300_bf_scaffold_306_curated_10
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9763..10047
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K8K7_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH00460.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_cont_300_bf_scaffold_306_curated_11
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

10050..10478
DNA (429bp) protein (143aa)
Fe-S metabolism protein SufE n=1 Tax=Spirosoma panaciterrae RepID=UPI00037D827F
Fe-S metabolism protein SufE {ECO:0000313|EMBL:AKD56888.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
Fe-S metabolism associated SufE; K02426 cysteine desulfuration protein SufE
SCNpilot_cont_300_bf_scaffold_306_curated_12
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

10496..10807
DNA (312bp) protein (104aa)
FeS assembly SUF system protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036557D6
FeS assembly SUF system protein {ECO:0000313|EMBL:AKD56889.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
FeS assembly SUF system protein
SCNpilot_cont_300_bf_scaffold_306_curated_13
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

10962..11366
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037A051B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB36227.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_306_curated_14
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11440..12315)
DNA (876bp) protein (292aa)
UbiA prenyltransferase; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-]
polyprenyltransferase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037834C5
Polyprenyltransferase {ECO:0000313|EMBL:AKD58677.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_306_curated_15
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12388..13326)
DNA (939bp) protein (313aa)
hydrolase TatD n=1 Tax=Spirosoma panaciterrae RepID=UPI0003732F00
TatD-related deoxyribonuclease; K07051
TatD-related deoxyribonuclease {ECO:0000313|EMBL:ADB36225.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_306_curated_16
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13559..14221
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035CE81F
Uncharacterized protein {ECO:0000313|EMBL:AKD56892.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_306_curated_17
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

14230..14880
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036B15F0
Uncharacterized protein {ECO:0000313|EMBL:AKD56893.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_306_curated_18
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14882..15559)
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000376EE99
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB36222.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_306_curated_19
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

15700..17508
DNA (1809bp) protein (603aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000381AB93
G-D-S-L family lipolytic protein
Lipolytic protein G-D-S-L family {ECO:0000313|EMBL:ADB39967.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_306_curated_20
unknown

Not on your lists

comp(17707..18654)
DNA (948bp) protein (316aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_306_curated_21
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18681..21305)
DNA (2625bp) protein (875aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000367659F
Uncharacterized protein {ECO:0000313|EMBL:AHF17144.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_306_curated_22
unknown

Not on your lists

21322..21582
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_306_curated_23
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21481..22386)
DNA (906bp) protein (302aa)
integrase n=1 Tax=Spirosoma panaciterrae RepID=UPI000377B5E3
integrase family protein; K03733 integrase/recombinase XerC
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_306_curated_24
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(22660..22857)
DNA (198bp) protein (66aa)
30S ribosomal protein S21 n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QBI7_SPILD
30S ribosomal protein S21; K02970 small subunit ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_306_curated_25
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22914..23840
DNA (927bp) protein (309aa)
Ppx/GppA phosphatase; K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
phosphatase GppA n=1 Tax=Spirosoma panaciterrae RepID=UPI00036CDD35
Ppx/GppA phosphatase {ECO:0000313|EMBL:ADB36168.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_306_curated_26
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

23966..24958
DNA (993bp) protein (331aa)
bile acid:sodium symporter n=1 Tax=Spirosoma panaciterrae RepID=UPI00037331A5
sodium symporter; K03453 bile acid:Na+ symporter, BASS family
Bile acid:sodium symporter {ECO:0000313|EMBL:ADB36166.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_306_curated_27
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25017..26195
DNA (1179bp) protein (393aa)
Polysaccharide pyruvyl transferase CsaB n=1 Tax=Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) RepID=I3VUG3_THESW
Uncharacterized protein {ECO:0000313|EMBL:EXG84765.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
polysaccharide pyruvyl transferase CsaB
SCNpilot_cont_300_bf_scaffold_306_curated_28
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

26192..27328
DNA (1137bp) protein (379aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
SCNpilot_cont_300_bf_scaffold_306_curated_29
unknown

Not on your lists

comp(27339..28298)
DNA (960bp) protein (320aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_306_curated_30
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

28497..28961
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037C404C
MarR family transcriptional regulator {ECO:0000313|EMBL:AKD56899.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
MarR family transcriptional regulator
Displaying items 1-30 of 105 in total

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