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SCNpilot_cont_300_bf_scaffold_303_curated

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_303_curated_1
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

72..434
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VZ25_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT95231.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_cont_300_bf_scaffold_303_curated_2
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

481..1398
DNA (918bp) protein (306aa)
transposase ISL3 n=4 Tax=Spirosoma panaciterrae RepID=UPI0003819FDB
transposase IS204/IS1001/IS1096/IS1165 family protein
Transposase IS204/IS1001/IS1096/IS1165 family protein {ECO:0000313|EMBL:AEI48156.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCNpilot_cont_300_bf_scaffold_303_curated_3
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1632..2402)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI0003624461
PKD domain-containing protein
PKD domain containing protein {ECO:0000313|EMBL:ADB40856.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_303_curated_4
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2771..3202)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00038026EF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB39165.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_303_curated_5
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3354..3851)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000371C941
Uncharacterized protein {ECO:0000313|EMBL:AKD54630.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_303_curated_6
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3942..5513
DNA (1572bp) protein (524aa)
histidine kinase (EC:2.7.13.3)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003763BFA
Histidine kinase {ECO:0000313|EMBL:AKD54631.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_303_curated_7
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5500..6174
DNA (675bp) protein (225aa)
response regulator n=1 Tax=Spirosoma panaciterrae RepID=UPI000372A3BD
LuxR family transcriptional regulator {ECO:0000313|EMBL:AKD54632.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
LuxR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_303_curated_8
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6311..6946
DNA (636bp) protein (212aa)
peroxidase (EC:1.11.1.7)
Peroxidase {ECO:0000313|EMBL:ADB36764.1}; EC=1.11.1.7 {ECO:0000313|EMBL:ADB36764.1};; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
peroxidase n=1 Tax=Spirosoma panaciterrae RepID=UPI000373318C
SCNpilot_cont_300_bf_scaffold_303_curated_9
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7028..7273
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003676589
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB36765.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_303_curated_10
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7391..8164
DNA (774bp) protein (258aa)
glycoside hydrolase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037DE21D
glycoside hydrolase family protein; K07273 lysozyme
Glycoside hydrolase family 25 {ECO:0000313|EMBL:ADB36766.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_303_curated_11
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8191..8934)
DNA (744bp) protein (248aa)
Shikimate dehydrogenase {ECO:0000313|EMBL:AKD54636.1}; EC=1.1.1.25 {ECO:0000313|EMBL:AKD54636.1};; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
shikimate dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25]
shikimate 5-dehydrogenase n=1 Tax=Spirosoma panaciterrae RepID=UPI00035F40BB
SCNpilot_cont_300_bf_scaffold_303_curated_12
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9027..9674)
DNA (648bp) protein (216aa)
membrane protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036F6256
Cytochrome O ubiquinol oxidase {ECO:0000313|EMBL:AKD54637.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein; K03975 membrane-associated protein
SCNpilot_cont_300_bf_scaffold_303_curated_13
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9795..10559)
DNA (765bp) protein (255aa)
phosphosulfolactate synthase (EC:4.4.1.19); K08097 phosphosulfolactate synthase [EC:4.4.1.19]
Phosphosulfolactate synthase {ECO:0000313|EMBL:ADB36770.1}; EC=4.4.1.19 {ECO:0000313|EMBL:ADB36770.1};; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
phosphosulfolactate synthase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037EC24F
SCNpilot_cont_300_bf_scaffold_303_curated_14
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

10690..11139
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037241BA
Thioesterase {ECO:0000313|EMBL:AKD54639.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
thioesterase superfamily protein
SCNpilot_cont_300_bf_scaffold_303_curated_15
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11951..13960
DNA (2010bp) protein (670aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003649A7F
Uncharacterized protein {ECO:0000313|EMBL:AKD54640.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_303_curated_16
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

14075..14527
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000366C833
Uncharacterized protein {ECO:0000313|EMBL:CCH53937.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein; K06934
SCNpilot_cont_300_bf_scaffold_303_curated_17
unknown

Not on your lists

14812..14976
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_303_curated_18
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

15420..15584
DNA (165bp) protein (55aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI00035D0157
Uncharacterized protein {ECO:0000313|EMBL:CCH55016.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_303_curated_19
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

15871..18219
DNA (2349bp) protein (783aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000367F454
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB37448.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_303_curated_20
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18240..19169)
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003792873
Uncharacterized protein {ECO:0000313|EMBL:AKD58535.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_303_curated_21
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19223..20155)
DNA (933bp) protein (311aa)
Putative lipase/esterase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L040_HALH1
lipase/esterase
Putative lipase/esterase {ECO:0000313|EMBL:AEE52749.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
SCNpilot_cont_300_bf_scaffold_303_curated_22
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(20217..20618)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003779C14
OsmC family protein {ECO:0000313|EMBL:CCH54449.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
OsmC family protein
SCNpilot_cont_300_bf_scaffold_303_curated_23
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20711..21943)
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000372F53B
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEE53445.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
SCNpilot_cont_300_bf_scaffold_303_curated_24
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22020..22361)
DNA (342bp) protein (114aa)
transcription initiation protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037BEA81
hypothetical protein
YCII-related protein {ECO:0000313|EMBL:AEV98335.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_300_bf_scaffold_303_curated_25
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22452..22865)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035F115B
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_cont_300_bf_scaffold_303_curated_26
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22898..23383)
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000368FF54
ribosomal-protein-alanine N-acetyltransferase
Ribosomal-protein-alanine N-acetyltransferase {ECO:0000313|EMBL:AFN30214.1}; TaxID=1191061 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca E718.;"
SCNpilot_cont_300_bf_scaffold_303_curated_27
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

23596..23841
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003672B7E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH00811.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_cont_300_bf_scaffold_303_curated_28
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

23963..25189
DNA (1227bp) protein (409aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003793FA1
Uncharacterized protein {ECO:0000313|EMBL:AKD55892.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
ErfK/YbiS/YcfS/YnhG family protein
SCNpilot_cont_300_bf_scaffold_303_curated_29
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(25159..25887)
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037BA230
Uncharacterized protein {ECO:0000313|EMBL:AKD55891.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_303_curated_30
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

25999..26742
DNA (744bp) protein (248aa)
ecsC n=1 Tax=Spirosoma panaciterrae RepID=UPI0003775DE1
EcsC {ECO:0000313|EMBL:AKD55890.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
Displaying items 1-30 of 80 in total

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