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SCNpilot_cont_300_bf_scaffold_283_curated

Search features with annotation key words

Displaying items 1-30 of 184 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_283_curated_1
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..473
DNA (471bp) protein (157aa)
RNA polymerase sigma factor RpoD n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KT84_STEMA
RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=69929 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. pruni.;"
SCNpilot_cont_300_bf_scaffold_283_curated_2
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

612..2945
DNA (2334bp) protein (778aa)
sugar hydrolase n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI00035F1827
Sugar hydrolase {ECO:0000313|EMBL:AJC47032.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_283_curated_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3097..3372)
DNA (276bp) protein (92aa)
AlpA family transcriptional regulator n=1 Tax=Pseudomonas geniculata RepID=UPI00029A67A1
phage transcriptional regulator AlpA
Phage transcriptional regulator, AlpA {ECO:0000313|EMBL:ACF52230.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
SCNpilot_cont_300_bf_scaffold_283_curated_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3359..4720)
DNA (1362bp) protein (454aa)
RNA-directed DNA polymerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI19_9GAMM
RNA-directed DNA polymerase {ECO:0000313|EMBL:EIL99110.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
RNA-directed DNA polymerase
SCNpilot_cont_300_bf_scaffold_283_curated_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4717..5166)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI20_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL99111.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_283_curated_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5198..5626)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI29_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL99120.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_283_curated_7
unknown

Not on your lists

comp(5662..5862)
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_283_curated_8
unknown

Not on your lists

comp(5846..6064)
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_283_curated_9
unknown

Not on your lists

comp(6057..6473)
DNA (417bp) protein (139aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_283_curated_10
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6470..7888)
DNA (1419bp) protein (473aa)
DNA (cytosine-5-)-methyltransferase (EC:2.1.1.37); K00558 DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37]
DNA methyltransferase n=1 Tax=Xanthomonas axonopodis RepID=UPI0002DCC4CD
DNA methyltransferase {ECO:0000313|EMBL:EWC53138.1}; TaxID=1401257 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. glycines str. 8ra.;"
SCNpilot_cont_300_bf_scaffold_283_curated_11
unknown

Not on your lists

comp(7881..8138)
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_283_curated_12
unknown

Not on your lists

comp(8128..8472)
DNA (345bp) protein (115aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_283_curated_13
unknown

Not on your lists

comp(8465..8695)
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_283_curated_14
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8873..9811)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TUZ0_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU99399.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_cont_300_bf_scaffold_283_curated_15
unknown

Not on your lists

comp(9808..10101)
DNA (294bp) protein (98aa)
Conserved domain protein n=1 Tax=Burkholderia pseudomallei Pasteur 52237 RepID=A8HKV0_BURPE
SCNpilot_cont_300_bf_scaffold_283_curated_16
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10109..10372)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Xanthomonas axonopodis Xac29-1 RepID=M4UCG6_9XANT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH78115.1}; TaxID=1304892 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis Xac29-1.;"
SCNpilot_cont_300_bf_scaffold_283_curated_17
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10392..10916)
DNA (525bp) protein (175aa)
Hypothetical transmembrane anchored protein n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FM74_STRMK
hypothetical protein
Hypothetical transmembrane anchored protein {ECO:0000313|EMBL:CAQ45442.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
SCNpilot_cont_300_bf_scaffold_283_curated_18
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10920..11360)
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L040_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EWC53141.1}; TaxID=1401257 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. glycines str. 8ra.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_283_curated_19
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11573..11806)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SNJ5_STRM5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACF52220.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
SCNpilot_cont_300_bf_scaffold_283_curated_20
Bordetella avium, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12440..12844
DNA (405bp) protein (135aa)
Phage regulatory protein n=1 Tax=Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) RepID=Q7WGR8_BORBR
cro; phage regulatory protein
Putative phage protein {ECO:0000313|EMBL:CAJ49048.1}; TaxID=360910 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella avium (strain 197N).;"
SCNpilot_cont_300_bf_scaffold_283_curated_21
unknown

Not on your lists

comp(12925..13128)
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_283_curated_22
Xanthomonas sp. Nyagatare, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13289..13759
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI0002EF8CF5
Uncharacterized protein {ECO:0000313|EMBL:KGK59595.1}; TaxID=1552758 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sp. Nyagatare.;"
Phage regulatory protein CII (CP76)
SCNpilot_cont_300_bf_scaffold_283_curated_23
unknown

Not on your lists

13759..14070
DNA (312bp) protein (104aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_283_curated_24
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14219..15175
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) RepID=Q72BX0_DESVH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAS95992.1}; TaxID=882 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB; 8303).;"
SCNpilot_cont_300_bf_scaffold_283_curated_25
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15175..16611
DNA (1437bp) protein (479aa)
dnaB; replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12]
Replicative DNA helicase n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7SWK2_STEMA
Replicative DNA helicase {ECO:0000313|EMBL:EJP76842.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
SCNpilot_cont_300_bf_scaffold_283_curated_26
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16617..16985
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030857D0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACF52215.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
SCNpilot_cont_300_bf_scaffold_283_curated_27
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16982..17593
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5L5A6_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EQM87192.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_283_curated_28
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17953..18138
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Oligella urethralis RepID=UPI00036FC7CF
hypothetical protein
Toxin-antitoxin system, toxin component, HicA family {ECO:0000313|EMBL:EFF73990.1}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii ATCC 43553.;"
SCNpilot_cont_300_bf_scaffold_283_curated_29
Burkholderia phymatum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18180..18602
DNA (423bp) protein (141aa)
antitoxin n=1 Tax=Burkholderia sp. JPY251 RepID=UPI000380F763
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACC71036.1}; TaxID=391038 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phymatum (strain DSM 17167 / STM815).;"
SCNpilot_cont_300_bf_scaffold_283_curated_30
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18751..18972
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TYR0_STEMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMI48868.1}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;"
Displaying items 1-30 of 184 in total

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