ggKbase home page

SCNpilot_cont_300_bf_scaffold_92_curated_24

Organism: scnpilot_dereplicated_Stenotrophomonas_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 26565..26993

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC n=1 Tax=Leptospirillum ferriphilum (strain ML-04) RepID=J9ZDJ7_LEPFM similarity UNIREF
DB: UNIREF100
  • Identity: 56.3
  • Coverage: 142.0
  • Bit_score: 166
  • Evalue 2.50e-38
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 56.3
  • Coverage: 142.0
  • Bit_score: 166
  • Evalue 7.90e-39
Tax=CG_Rhodof_04 similarity UNIPROT
DB: UniProtKB
  • Identity: 64.3
  • Coverage: 143.0
  • Bit_score: 191
  • Evalue 1.00e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Rhodof_04 → Rhodoferax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 429
ATGCGTGCGTTGCTTGACGTGAACGTGCTGATCGCACTGCACGACAGCGACCACGTCCACCATCACCCTGCCTCGGCCTGGCTGCGCACGCACATCGCGCATGGCTGGGCCAGTTGTCCGCTTACCCAGAACGGTTGCCTGCGCATCATGTCCCGGCCCGGATACGCCAAGCCGCAACCGCTGGGCAGCCTGGTGAGCATGCTGGCGCGTTCCACGTCCACGCGCTTCCATGCGTTCTGGCCGGACGCCATCAGCGTGCTGGATCGCACACATTTCCAGCATGGCTACATCCACAGTCCGCGACAGTTGACCGATCTGTACCTGCTCGCGCTCGCGGTGCACCACGGCGGGCGGCTGGTGACGTTCGACCGGCACATTGCGCTGAGTGCGGTAGCGGGCGCGCGGCCCGAGCACCTGGTGCAGTTGTAA
PROTEIN sequence
Length: 143
MRALLDVNVLIALHDSDHVHHHPASAWLRTHIAHGWASCPLTQNGCLRIMSRPGYAKPQPLGSLVSMLARSTSTRFHAFWPDAISVLDRTHFQHGYIHSPRQLTDLYLLALAVHHGGRLVTFDRHIALSAVAGARPEHLVQL*