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SCNpilot_cont_300_bf_scaffold_92_curated

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Displaying items 1-30 of 582 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_92_curated_1
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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540..2708
DNA (2169bp) protein (723aa)
TonB-denpendent receptor n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031B82EE
TonB-dependent siderophore receptor {ECO:0000313|EMBL:ACF49855.1}; Flags: Precursor;; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
TonB-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein
SCNpilot_cont_300_bf_scaffold_92_curated_2
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2705..3295
DNA (591bp) protein (197aa)
aminotransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E7106F
NODE_54, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ97218.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
pnuC; PnuC-like transporter linked to homoserine kinase and OMR; K03811 nicotinamide mononucleotide transporter
SCNpilot_cont_300_bf_scaffold_92_curated_3
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3567..4298
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7H7B4_XANCT
Uncharacterized protein {ECO:0000313|EMBL:ELQ13851.1}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_92_curated_4
Burkholderia oklahomensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4357..4815
DNA (459bp) protein (153aa)
Alanin-rich signal peptide protein id=2521490 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIO69828.1}; TaxID=342113 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia oklahomensis.;"
SCNpilot_cont_300_bf_scaffold_92_curated_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4871..5782
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3N3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94074.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein; K07454 putative restriction endonuclease
SCNpilot_cont_300_bf_scaffold_92_curated_6
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6268..7434
DNA (1167bp) protein (389aa)
Putative uncharacterized protein n=1 Tax=Methylobacterium extorquens DSM 13060 RepID=H1KCF2_METEX
Putative uncharacterized protein {ECO:0000313|EMBL:EHP94776.1}; TaxID=882800 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens DSM 13060.;"
Lipase (Class 3)
SCNpilot_cont_300_bf_scaffold_92_curated_7
Xanthomonas alfalfae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7685..8047)
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=2 Tax=Xanthomonas RepID=G2LRU9_9XANT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEO42219.1}; TaxID=981368 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. citrumelo F1.;"
SCNpilot_cont_300_bf_scaffold_92_curated_8
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8044..8316)
DNA (273bp) protein (91aa)
Uncharacterized protein n=3 Tax=Xanthomonas campestris pv. campestris RepID=B0RNC3_XANCB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP49958.1}; TaxID=509169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. campestris (strain B100).;"
SCNpilot_cont_300_bf_scaffold_92_curated_9
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8904..12050)
DNA (3147bp) protein (1049aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZDC3_9FIRM
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
SCNpilot_cont_300_bf_scaffold_92_curated_10
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12056..13150)
DNA (1095bp) protein (365aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
Cytosine-specific methyltransferase n=2 Tax=Salmonella enterica subsp. enterica serovar Weltevreden RepID=E9AA22_SALET
Modification methylase FnuDI
SCNpilot_cont_300_bf_scaffold_92_curated_11
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13304..15991)
DNA (2688bp) protein (896aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
2-oxo-acid dehydrogenase E1 subunit, homodimeric type (EC:1.2.4.1); K00163 pyruvate dehydrogenase E1 component [EC:1.2.4.1]
Pyruvate dehydrogenase E1 component n=2 Tax=Stenotrophomonas maltophilia RepID=J7UQ02_STEMA
SCNpilot_cont_300_bf_scaffold_92_curated_12
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16425..16934
DNA (510bp) protein (170aa)
PadR-like family transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5U161_STEMA
PadR family transcriptional regulator {ECO:0000313|EMBL:AHY60529.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
PadR-like family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_92_curated_13
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16959..17750
DNA (792bp) protein (264aa)
iron utilization protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003127A17
Iron utilization protein {ECO:0000313|EMBL:AHY60530.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
iron-chelator utilization protein
SCNpilot_cont_300_bf_scaffold_92_curated_14
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17821..18132
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Xanthomonadaceae RepID=UPI00029A6FF1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJP79733.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
SCNpilot_cont_300_bf_scaffold_92_curated_15
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18202..18651
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KUE9_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EQM82631.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_92_curated_16
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18761..19450)
DNA (690bp) protein (230aa)
hypothetical protein n=7 Tax=Xanthomonas axonopodis RepID=UPI000300A597
hypothetical protein
YceI family protein {ECO:0000313|EMBL:ACF50064.1}; Flags: Precursor;; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
SCNpilot_cont_300_bf_scaffold_92_curated_17
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19537..20127)
DNA (591bp) protein (197aa)
Putative NADH dehydrogenase/NAD(P)H nitroreductase SB85_10765 {ECO:0000256|HAMAP-Rule:MF_01204}; EC=1.-.-.- {ECO:0000256|HAMAP-Rule:MF_01204};; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
rutE; nitroreductase (EC:1.-.-.-); K09019 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
malonic semialdehyde reductase n=1 Tax=Xanthomonas RepID=UPI000262B53D
SCNpilot_cont_300_bf_scaffold_92_curated_18
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20258..21232
DNA (975bp) protein (325aa)
nucleoside-diphosphate-sugar epimerase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003076BB0
Nucleoside-diphosphate sugar epimerase {ECO:0000313|EMBL:AHY60536.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein; K07276 hypothetical protein
SCNpilot_cont_300_bf_scaffold_92_curated_19
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21269..22117
DNA (849bp) protein (283aa)
Putative uncharacterized protein n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0BH95_9XANT
Membrane protein {ECO:0000313|EMBL:AHY60537.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_92_curated_20
Xanthomonas gardneri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22135..22653
DNA (519bp) protein (173aa)
Putative uncharacterized protein n=1 Tax=Xanthomonas gardneri ATCC 19865 RepID=F0C4Z3_9XANT
Uncharacterized protein {ECO:0000313|EMBL:EGD19413.1}; Flags: Precursor;; TaxID=925777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas gardneri ATCC 19865.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_92_curated_21
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22815..23369
DNA (555bp) protein (185aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000319CDA5
Membrane protein {ECO:0000313|EMBL:AHY60540.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
Putative preQ0 transporter; K09125 hypothetical protein
SCNpilot_cont_300_bf_scaffold_92_curated_22
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23394..26213)
DNA (2820bp) protein (940aa)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015000}; EC=2.7.7.42 {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015004};; Glutamine-synthase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; [Glutamate--ammonia-ligase] adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
glnE; putative glutamate-ammonia-ligase adenylyltransferase (EC:2.7.7.42); K00982 glutamate-ammonia-ligase adenylyltransferase [EC:2.7.7.42]
glutamate-ammonia ligase adenylyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037582BB
SCNpilot_cont_300_bf_scaffold_92_curated_23
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26314..26565
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NZQ3_AROAE
hypothetical protein
Tax=CG_Rhodof_02
SCNpilot_cont_300_bf_scaffold_92_curated_24
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26565..26993
DNA (429bp) protein (143aa)
Ribonuclease VapC n=1 Tax=Leptospirillum ferriphilum (strain ML-04) RepID=J9ZDJ7_LEPFM
hypothetical protein
Tax=CG_Rhodof_04
SCNpilot_cont_300_bf_scaffold_92_curated_25
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27298..28812
DNA (1515bp) protein (505aa)
succinate CoA transferase (EC:3.1.2.1); K01067 acetyl-CoA hydrolase [EC:3.1.2.1]
acetyl-CoA hydrolase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FCFAD7
Acetyl-CoA hydrolase {ECO:0000313|EMBL:AHY60543.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
SCNpilot_cont_300_bf_scaffold_92_curated_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28882..29220)
DNA (339bp) protein (113aa)
Protein YegP n=1 Tax=Enterobacter cloacae subsp. dissolvens SDM RepID=I6SKX6_ENTCL
protein YegP
Uncharacterized protein {ECO:0000313|EMBL:ETX63641.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
SCNpilot_cont_300_bf_scaffold_92_curated_27
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29353..29613)
DNA (261bp) protein (87aa)
Putative endonuclease containing a URI domain n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KTB7_STEMA
putative endonuclease containing a URI domain; K07461 putative endonuclease
Nuclease {ECO:0000313|EMBL:KDE90542.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
SCNpilot_cont_300_bf_scaffold_92_curated_28
unknown

Not on your lists

comp(29632..30078)
DNA (447bp) protein (149aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_92_curated_29
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30223..31296)
DNA (1074bp) protein (358aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54); K01626 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7GK84_XANCT
SCNpilot_cont_300_bf_scaffold_92_curated_30
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31603..32049
DNA (447bp) protein (149aa)
thioredoxin; K03672 thioredoxin 2 [EC:1.8.1.8]
Thioredoxin n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7USM3_PSEUP
Thioredoxin {ECO:0000313|EMBL:KGM57764.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
Displaying items 1-30 of 582 in total

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