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SCNpilot_cont_300_bf_scaffold_506_curated_6

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(3078..3518)

Top 3 Functional Annotations

Value Algorithm Source
Transposase IS3/IS911 family protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CYG1_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 85.6
  • Coverage: 146.0
  • Bit_score: 243
  • Evalue 9.70e-62
transposase IS3/IS911 family protein; K07483 transposase similarity KEGG
DB: KEGG
  • Identity: 85.6
  • Coverage: 146.0
  • Bit_score: 243
  • Evalue 3.00e-62
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:ACS18920.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.6
  • Coverage: 146.0
  • Bit_score: 243
  • Evalue 1.40e-61

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 441
ATGACTGACGATTTGGAAGCCCTCAAGCGCCGACTTGTGGTGGGGCACAAGAGCGACGGACGCAGCGTGTATGACGAAGCGGCGAAGTCGGAGCTGGTGGCACTGTGTCGGCAGCCAGGCGCCTCGGTGTCGCGCCTGGCGCGCGAGTGCGGCGTGAATGCCAACCAGGTCGGACGCTGGCTTCGCGAGCATGGCCATGGTCGCGCGCATAAGGCCGTTGCCTGCGTGGTGCCGGCGCCTGCGGCGTTCGTGGCGATCGCGGTGCCGCCAGCGTCGCCGATCGGAGCTCAAGGCGGCGACGACATCGTTGCCATGATGGACGTGCAGGCACGCTTGCCCAATGGCGTGGCGATCGACCTTCGTGGCGTGCAGGTGCGCCACGTCAGCGAGGTGATCGAGGCATTGGGGAGGCTGCCGTGTTTCGCTTCGACGAAGACCTGA
PROTEIN sequence
Length: 147
MTDDLEALKRRLVVGHKSDGRSVYDEAAKSELVALCRQPGASVSRLARECGVNANQVGRWLREHGHGRAHKAVACVVPAPAAFVAIAVPPASPIGAQGGDDIVAMMDVQARLPNGVAIDLRGVQVRHVSEVIEALGRLPCFASTKT*