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SCNpilot_cont_300_bf_scaffold_506_curated_24

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(20456..21361)

Top 3 Functional Annotations

Value Algorithm Source
LysR-family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJD8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 56.3
  • Coverage: 293.0
  • Bit_score: 312
  • Evalue 4.60e-82
LysR-family transcriptional regulator {ECO:0000313|EMBL:EIK89328.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.3
  • Coverage: 293.0
  • Bit_score: 312
  • Evalue 6.40e-82
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 56.3
  • Coverage: 293.0
  • Bit_score: 309
  • Evalue 1.60e-81

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 906
ATGCGCGACCTGCCCTCCGTGCGGCAGATGCGCGCCTTCGTCGCCGTCTACCAGTTGGGGCACCTGTCAGCCGCGGCCGAGCAGCTGTCGGTGACGCAGCCGGCCGTGACGGTGCTGATCCGTGAACTCGAAGCGCGGCTCGGCGTGAAGCTGTTCGATCGCACCACGCGCAGCCTGCGCCGCACCGAAGCGGCCGATGAAGCGATCGGCTTCGTCATGCGCGCGCTCGACGAGATGCACCAGCTGAGTCGCAGCCTGTCGGACCTGTCGGGTGTGCGGCGCGGGCGCTTTCGCGTGGCGGCCACGTCCACCGTGGCGCAAACCCTGCTGCCACCGCTGTTGCGCAACTTCCTGCAGGCGCATCCCGATGTGGAGGTGTCGGTGCAGGATTGCGGCCCGCTGGACTTCGTGCAGACGCTCGCCTCCGACCGCGCCGATGTCGGCATCGGCTCGCTCGAGCAGCCGGTGCCGGGCCTGGTCGAACATGTGTTCCTGCGCGACGAGCTGGTGGCGGCCGCGCTGCCCGGCAAGGGTTTCGATGGCCAGTCTGCGACGATGACCTGGCGCCAACTGGTGCAGCACCCGCTGATCGTCGTGAAGCCGGGCTATGGCATTCGACGGCTGATCGATAAAACGCTCGCCGATGAAGGCCTGCTGGAACAGATGCAGGTGCGCCAGGAAGTGGCGCTGCTCAGCACTGCGCTCGCAATGGCTGCGGCCGACCTCGGCGTGGCCGTGGTGCCGCGCTCGATCGTGACGCACGGCGCTTTCCCCAGCATGGTGACGCGGCGCCTGACGCGGCCCGTCGTCGAGCGCCCGGTGGCGCTGGTCTACCGCGTCGAGCGCAGTCTGTCGCCGGCGGCCCTGGCGTTTGCGCGCAGCTGCGTGCCGACCCTCGAGGGCTGA
PROTEIN sequence
Length: 302
MRDLPSVRQMRAFVAVYQLGHLSAAAEQLSVTQPAVTVLIRELEARLGVKLFDRTTRSLRRTEAADEAIGFVMRALDEMHQLSRSLSDLSGVRRGRFRVAATSTVAQTLLPPLLRNFLQAHPDVEVSVQDCGPLDFVQTLASDRADVGIGSLEQPVPGLVEHVFLRDELVAAALPGKGFDGQSATMTWRQLVQHPLIVVKPGYGIRRLIDKTLADEGLLEQMQVRQEVALLSTALAMAAADLGVAVVPRSIVTHGAFPSMVTRRLTRPVVERPVALVYRVERSLSPAALAFARSCVPTLEG*