ggKbase home page

SCNpilot_cont_300_bf_scaffold_506_curated_29

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 25267..26016

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase subunit HpaG2 (EC:5.3.3.10); K05921 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-] similarity KEGG
DB: KEGG
  • Identity: 79.5
  • Coverage: 254.0
  • Bit_score: 413
  • Evalue 6.40e-113
4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit {ECO:0000313|EMBL:ACS16907.1}; EC=5.3.3.10 {ECO:0000313|EMBL:ACS16907.1};; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.5
  • Coverage: 254.0
  • Bit_score: 413
  • Evalue 2.90e-112
4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CXA3_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 79.5
  • Coverage: 254.0
  • Bit_score: 413
  • Evalue 2.10e-112

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
ATGAAACACGCCCGCATCATCCTTGAAGGCCGGACCCACGACGCCACCGAGCAGGACGGGCGACTGAAGCTGGCCGACGGCCGGCTGGTCGGCTTCGACGCTGTCACCACCTGGCTGCCGCCGCTCGCACCGACCTCGCGTGCGCGCACCATCCTCGCGCTCGGCCTGAACTATGCCGACCACGCGAAGGAACTCGCGTTCAAGGCGCCCGAAGAACCGTTGGTGTTCATCAAGGGCGAAGGCAGCCTGATCGGCCACCGGCAGAAGACGATCCGGCCGGCCGGCGTCACCTACATGCACTACGAGTGCGAACTCGCCATCGTGGTCGGCAAGACTGCGCGCAACGTGAAACGCGCCGATGCCTATGACTACATCGACGGCTACACGGTGGCCAACGACTATGCCATCCGCGACTACCTCGAGAACTGGTATCGCCCCAACCTGCGCGTGAAGAACCGCGACACGTGCACGCCGATCGGCCCGTGGTTCGTCGATGCGGAAGACGTGCCGAACCCGATGGCCCTGGCACTGTCCACCACCGTCAACGGCAAGGTCACGCAGTCGGGCAGCACCAAGGACATGATCTTCGATGCACCCTTCCTGATCGAGTACTTCAGCAGCTTCATGACCCTGTCGCAGGGCGATCTGATCCTGACCGGCACGCCCGATGGCGTCGTCGACTGCCATCCCGGCGACGTGATCGTTACCGAGATCGAGGGCATCGGCGCGCTCGTCAACACCATTGCATGA
PROTEIN sequence
Length: 250
MKHARIILEGRTHDATEQDGRLKLADGRLVGFDAVTTWLPPLAPTSRARTILALGLNYADHAKELAFKAPEEPLVFIKGEGSLIGHRQKTIRPAGVTYMHYECELAIVVGKTARNVKRADAYDYIDGYTVANDYAIRDYLENWYRPNLRVKNRDTCTPIGPWFVDAEDVPNPMALALSTTVNGKVTQSGSTKDMIFDAPFLIEYFSSFMTLSQGDLILTGTPDGVVDCHPGDVIVTEIEGIGALVNTIA*