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SCNpilot_cont_300_bf_scaffold_506_curated_31

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 27513..27839

Top 3 Functional Annotations

Value Algorithm Source
Aromatic-ring-opening dioxygenase LigAB, LigA subunit n=1 Tax=Variovorax paradoxus RepID=UPI000369FD25 similarity UNIREF
DB: UNIREF100
  • Identity: 87.0
  • Coverage: 108.0
  • Bit_score: 200
  • Evalue 9.10e-49
extradiol ring-cleavage dioxygenase LigAB LigA subunit similarity KEGG
DB: KEGG
  • Identity: 75.9
  • Coverage: 108.0
  • Bit_score: 176
  • Evalue 4.40e-42
Extradiol ring-cleavage dioxygenase LigAB LigA subunit {ECO:0000313|EMBL:EZP52138.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.9
  • Coverage: 108.0
  • Bit_score: 176
  • Evalue 1.50e-41

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Taxonomy

Delftia sp. RIT313 → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 327
ATGAGCCTCTACGCTATGCAGAAATTCCTGTTCGAACTCAACCGCGGTTCGGAAGTGCAACGCCGCTACCGCGAAGACCGCGAGGCGCTGCTGAAGTCGTACGATTTCAATGAAGAAGAGTACCGCGCCGTGTACGACGGCGACATCGGCAAGCTGTACGTGCTGGGCTGCAACGGCCAGTTGCTAATGCACTTCGCGCCGCTGTTGGGCATGCCGTGGGCCGAGTACATCCAGGCGATGCGCGACGGCATTCAAAAGTACGGCCCAGTGCGTGCGGGGGTCTACGCGATGACCACCGGCATGGACGACAAGGTCGCAGGAGTCTAG
PROTEIN sequence
Length: 109
MSLYAMQKFLFELNRGSEVQRRYREDREALLKSYDFNEEEYRAVYDGDIGKLYVLGCNGQLLMHFAPLLGMPWAEYIQAMRDGIQKYGPVRAGVYAMTTGMDDKVAGV*