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SCNpilot_cont_300_bf_scaffold_421_curated_38

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 51583..53271

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1 n=1 Tax=Variovorax sp. CF313 RepID=J3CVM4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 562.0
  • Bit_score: 1089
  • Evalue 0.0
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 562.0
  • Bit_score: 1089
  • Evalue 0.0
rpsA; 30S ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 99.5
  • Coverage: 562.0
  • Bit_score: 1088
  • Evalue 0.0

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1689
ATGTCTGAATCTTTTGCCGACCTATTCGAAGAGTCCCTGAAGCGTTCCGAAATGCGCACCGGCGAGGTCATCACGGCCGAAGTCGTGCGTGTCGAACACAACCACGTCGTCGTCAACGCCGGTCTGAAGTCCGAAGCGTATGTGCCGATCGAAGAGTTCAAGAACGACAAGGGCGAACTCGAAGTTCAGGCCGGTGACTTCGTTTCCGTTGCCATCGGCAGCGTCGAAAACGGCTACGGCGACACCATCCTCTCGCGCGACACCGCCAAGCGTCTGGCTTCGTGGCTCGCGCTCGAGAAGGCGCTGGAATCGGGCGACTTCGTCACCGGCACCACCAGCGGCAAGGTCAAGGGCGGCCTCACGGTCCTGGTCAACGGCATCCGCGCATTCCTGCCGGGCTCGCTGATCGACACGCGTCCGATCAAGGACCTGACCCCGTACGAGAACAAGACCCTCGAATTCAAGGTCATCAAGCTCGACCGCAAGCGCAACAACGTCGTGCTGTCGCGCCGTGCCGTGGTCGAAGCCAGCATGGGCGAAGAACGCGCCAAGCTGATGGAAACGCTGAAGGAAGGCGCAGTCGTGCGCGGCGTGGTCAAGAACATCACCGAATACGGTGCGTTCGTGGACCTCGGCGGCATCGACGGCCTGCTGCACATCACCGACATGGCATGGCGCCGTGTCCGCCACCCGAGCGAAGTCGTTCAGGCCGGCCAGGAAATCACCGCCAAGATCCTCAAGTTCGACACCGAAAAGAACCGTGTCTCGCTGGGTCTCAAGCAAATGGGTGATGACCCGTGGATGGGCGTTTCGCGCCGCTACCCGCAATCGACCCGCCTGTTCGGCAAGGTCACGAACATTGCCGACTACGGCGCGTTCGTCGAACTCGAACCCGGCATCGAAGGCCTGGTGCACGTCTCCGAAATGGACTGGACCAACAAGAACATCGCTCCGAACAAGATCGTCTCGCTGGGCGACGAAGTCGAAGTCATGGTCCTGGAAATCGACGAAGACAAGCGCCGCATCAGCCTGGGCATGAAGCAGTGCAAGGCCAACCCGTGGCAAGAGTTCGCTCAGAACACGAAGCGTGGCGACCGCGTCAAGGGCCCGATCAAGTCGATCACCGACTTCGGCGTGTTCGTGGGCCTGGCTGCCGGCATCGACGGCCTGGTGCACCTGTCGGACCTCTCGTGGAACGAAGCCGGCGAAACCGCCGTTCGCAACTACAAGAAGGGCCAGGAAGTCGAAGCGATCGTGCTGGCAGTCGACGTCGACCGCGAGCGCATCTCGCTGGGCATCAAGCAGCTCGACAGCGACCCGTTCACCACGTTCACCACCGTGAACGACAAGGGCCAGATCGTGACCGGCAAGGTCAAGACCGTGGACGCCCGCGGCGCTGAAATCGACCTCGGCGAAGACATCATCGGCTACCTGCGTGCTTCGGAAATCTCGCGCGACCGCGTCGAAGATGCCCGCAACGTGCTGAAGGAAGGCGACGAAGTCACCGCCATCGTCGTGAACGTGGATCGCAAGACCCGCAACATCCAGCTGTCGATCAAGCAGAAGGACATGGTCGACGAACAAGGCGCCATGGCCAGCCTGAGCCAGCAGTCGGCACGCGAAAACGCGGGCACGACCAGCCTGGGCGCACTGCTGCGCGCCAAGCTCGACAACAGCGACAACAAGTAA
PROTEIN sequence
Length: 563
MSESFADLFEESLKRSEMRTGEVITAEVVRVEHNHVVVNAGLKSEAYVPIEEFKNDKGELEVQAGDFVSVAIGSVENGYGDTILSRDTAKRLASWLALEKALESGDFVTGTTSGKVKGGLTVLVNGIRAFLPGSLIDTRPIKDLTPYENKTLEFKVIKLDRKRNNVVLSRRAVVEASMGEERAKLMETLKEGAVVRGVVKNITEYGAFVDLGGIDGLLHITDMAWRRVRHPSEVVQAGQEITAKILKFDTEKNRVSLGLKQMGDDPWMGVSRRYPQSTRLFGKVTNIADYGAFVELEPGIEGLVHVSEMDWTNKNIAPNKIVSLGDEVEVMVLEIDEDKRRISLGMKQCKANPWQEFAQNTKRGDRVKGPIKSITDFGVFVGLAAGIDGLVHLSDLSWNEAGETAVRNYKKGQEVEAIVLAVDVDRERISLGIKQLDSDPFTTFTTVNDKGQIVTGKVKTVDARGAEIDLGEDIIGYLRASEISRDRVEDARNVLKEGDEVTAIVVNVDRKTRNIQLSIKQKDMVDEQGAMASLSQQSARENAGTTSLGALLRAKLDNSDNK*