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SCNpilot_cont_300_bf_scaffold_403_curated_35

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 37256..37639

Top 3 Functional Annotations

Value Algorithm Source
Flagellar basal body protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CXP1_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 74.0
  • Coverage: 127.0
  • Bit_score: 180
  • Evalue 1.50e-42
flagellar basal body protein; K02387 flagellar basal-body rod protein FlgB similarity KEGG
DB: KEGG
  • Identity: 74.0
  • Coverage: 127.0
  • Bit_score: 180
  • Evalue 4.70e-43
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.0
  • Coverage: 127.0
  • Bit_score: 180
  • Evalue 2.10e-42

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 384
ATGACAGAAGGAATCGAAGCCGCGACGAGCGCGGCGCTCACGCTTGCCCTGGATGCGGCCAGCCTGCGTCAGCAGGCCATCGCCGCCAATATCGCAAATGCCAACGTGAACGGCTACGTGCCGCAGCGTGTGAGCTTCGAAGCCCAGTTGGAGGACGCGCGTCAGAGCATGGCGCACATAGGCCGCCTGGATCCTGTGTCTCTGGGGCAGGTGCAGCCGCGCCTGGAGCCCGCGGTCGGGCGCTTCGGGTCGTCGTCCTTGGTTCAGCTGGACATGGAAGCCGCCGAGATGGCGCGCAATGCCGTCCACTATCAGGCGCTGGTCAAGGGACTGTCGCGCCATTTCTCGATTCTCTCGATGGCTGCCGGCGACGGCAGGAAATAG
PROTEIN sequence
Length: 128
MTEGIEAATSAALTLALDAASLRQQAIAANIANANVNGYVPQRVSFEAQLEDARQSMAHIGRLDPVSLGQVQPRLEPAVGRFGSSSLVQLDMEAAEMARNAVHYQALVKGLSRHFSILSMAAGDGRK*