ggKbase home page

SCNpilot_cont_300_bf_scaffold_403_curated_36

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 37641..38090

Top 3 Functional Annotations

Value Algorithm Source
Flagellar basal-body rod protein FlgC n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CXP2_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 73.4
  • Coverage: 154.0
  • Bit_score: 208
  • Evalue 3.50e-51
flagellar basal-body rod protein FlgC; K02388 flagellar basal-body rod protein FlgC similarity KEGG
DB: KEGG
  • Identity: 73.4
  • Coverage: 154.0
  • Bit_score: 208
  • Evalue 1.10e-51
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 154.0
  • Bit_score: 208
  • Evalue 4.90e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 450
ATGAACTACGCAGATTCTTTTGCGATCAGCGCGATCGGCATGAACATCGAGCGTGCGCGCGTCGACGTTGCCGCACTCAACCTCGCGAACGCAAACACCGTGCAGGGCGCGGGTGGCCAGAGCTACCAGCCGCTTCGCGTCATTGCCCAGGTGCGAGACGACGCGCGCTTCGGCACGATGGTCGGCCGCGGGCTGGACAGCGCCGGCAGCATGGCGCAGTTGACGCCCTCGATGCAGGTCGTGGCGACGCAGGGTGCCTCGCGCATGGTCTACGAGCCGAGCCATCCCCTGGCCAACGCACAAGGTTTTGTCGCCTACGCGGCGGTGGATCCCGCGACCGAGATGGTCAGCATGATGAGCGCTACGCGTGCCTACGAAGCCAACGTCTCCGCGATGAATACGGCGCGGACCCTGGCGCTGCGTGCGCTGGACATCGGGAGCGGCGCATGA
PROTEIN sequence
Length: 150
MNYADSFAISAIGMNIERARVDVAALNLANANTVQGAGGQSYQPLRVIAQVRDDARFGTMVGRGLDSAGSMAQLTPSMQVVATQGASRMVYEPSHPLANAQGFVAYAAVDPATEMVSMMSATRAYEANVSAMNTARTLALRALDIGSGA*