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SCNpilot_cont_300_bf_scaffold_174_curated_142

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 166958..167473

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion system lysozyme-related protein n=1 Tax=Variovorax sp. CF313 RepID=J2KPU0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 96.4
  • Coverage: 169.0
  • Bit_score: 321
  • Evalue 4.30e-85
Type VI secretion system lysozyme-related protein {ECO:0000313|EMBL:EJL75068.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.4
  • Coverage: 169.0
  • Bit_score: 321
  • Evalue 6.00e-85
putative type VI secretion system protein, lysozyme-like protein similarity KEGG
DB: KEGG
  • Identity: 94.7
  • Coverage: 171.0
  • Bit_score: 317
  • Evalue 3.30e-84

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
ATGGCTGAACTCACCGCGCAGGAGCGGTTGCAGCCCTCGCTGCTCGACCGGCTCATCGACCATGCACCCGACGAGAAGCGCGAGAGCGACGAGAAGCGCACCCTCACCAAGCAGGCGCTGCGCCAGGCCGTGCTGCGCGACCTGGGCTGGCTCTTCAATGCCACCGGCCACGGCCTCGCGATGGACGACAAGCAGTACCCGAACGTCGCGCGCTCGGTCATCAACTACGGATTGCCTATGCTGTCTGGCCAGTTCACCTCGTCGGTGCAGCGTGTCAGCATGGAACAGGCTTTGAAGAACGCAATCCTGCAGTTCGAGCCGCGCATTCTGTCCCGCACCCTCGAAGTAGAACTCGTCATGGAAGGACCCGCACTGGACTCCCACAACAGCATCGGCCTGCAGATCCGCGGCATGCTGTGGGCGCAGCCGGTGCCGCTCGAGTTCCTGATGCGAAGCCGCGTAGACCTCGAAGAGGGCCGCATCGAGATCGTGGACATGGCGCAAAACCCAAGGTAA
PROTEIN sequence
Length: 172
MAELTAQERLQPSLLDRLIDHAPDEKRESDEKRTLTKQALRQAVLRDLGWLFNATGHGLAMDDKQYPNVARSVINYGLPMLSGQFTSSVQRVSMEQALKNAILQFEPRILSRTLEVELVMEGPALDSHNSIGLQIRGMLWAQPVPLEFLMRSRVDLEEGRIEIVDMAQNPR*