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SCNpilot_cont_500_bf_scaffold_20013

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_20013_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..814)
DNA (813bp) protein (271aa)
Putative Beta-(1-3)-glucosyl transferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WM03_9GAMM
exo-beta-1,3-glucanase
Exo-beta-1,3-glucanase {ECO:0000313|EMBL:AGG90254.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_20013_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

991..1380
DNA (390bp) protein (130aa)
GntR family transcriptional regulator n=1 Tax=Dyella ginsengisoli RepID=UPI0003496C25
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AGG87211.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_20013_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1377..2273
DNA (897bp) protein (299aa)
Multidrug ABC transporter ATPase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8D2_9GAMM
Multidrug ABC transporter ATPase {ECO:0000313|EMBL:EIL95723.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ABC-type multidrug transport system, ATPase component
SCNpilot_cont_500_bf_scaffold_20013_4
unknown

Not on your lists

2311..2625
DNA (315bp) protein (105aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_20013_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2772..3221)
DNA (450bp) protein (150aa)
Starvation-inducible DNA-binding protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WM15_9GAMM
DpsA protein {ECO:0000313|EMBL:EIL94440.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA-binding ferritin-like protein (oxidative damage protectant)
SCNpilot_cont_500_bf_scaffold_20013_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3360..4979
DNA (1620bp) protein (540aa)
ATP-dependent RNA helicase n=1 Tax=Rhodanobacter denitrificans RepID=I4WM16_9GAMM
ATP-dependent RNA helicase {ECO:0000313|EMBL:EIL94441.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ATP-dependent helicase HrpA
SCNpilot_cont_500_bf_scaffold_20013_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4940..7303
DNA (2364bp) protein (788aa)
ATP-dependent RNA helicase n=1 Tax=Rhodanobacter denitrificans RepID=I4WM16_9GAMM
ATP-dependent helicase HrpA {ECO:0000313|EMBL:AGG90242.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
ATP-dependent helicase HrpA
SCNpilot_cont_500_bf_scaffold_20013_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7313..7912)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WM17_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90241.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_20013_9
unknown

Not on your lists

comp(7878..8513)
DNA (636bp) protein (212aa)
Uncharacterized 35.5 kDa protein in transposon Tn4556 n=1 Tax=Streptomyces fradiae RepID=YT35_STRFR
SCNpilot_cont_500_bf_scaffold_20013_10
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9240..9962
DNA (723bp) protein (241aa)
(P)ppGpp synthetase, RelA/SpoT family n=1 Tax=Rhodanobacter denitrificans RepID=M4NH14_9GAMM
(p)ppGpp synthetase, RelA/SpoT family
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_20013_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10086..11537
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4Q2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94443.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_20013_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11483..11695
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WM19_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90239.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_20013_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11703..12542
DNA (840bp) protein (280aa)
Nucleoside-diphosphate-sugar epimerase n=2 Tax=Rhodanobacter denitrificans RepID=M4NKM1_9GAMM
nucleoside-diphosphate-sugar epimerase
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:AGG90238.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_20013_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12722..13339
DNA (618bp) protein (206aa)
Penicillin-binding protein 1B n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSB2_9GAMM
Penicillin-binding protein 1B {ECO:0000256|PIRNR:PIRNR002799}; Short=PBP-1b {ECO:0000256|PIRNR:PIRNR002799};; Short=PBP1b {ECO:0000256|PIRNR:PIRNR002799};; Murein polymerase {ECO:0000256|PIRNR:PIRNR002799}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
penicillin-binding protein 1B
SCNpilot_cont_500_bf_scaffold_20013_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13321..14247
DNA (927bp) protein (309aa)
Penicillin-binding protein 1B n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4Q4_9GAMM
Penicillin-binding protein 1B {ECO:0000256|PIRNR:PIRNR002799}; Short=PBP-1b {ECO:0000256|PIRNR:PIRNR002799};; Short=PBP1b {ECO:0000256|PIRNR:PIRNR002799};; Murein polymerase {ECO:0000256|PIRNR:PIRNR002799}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
penicillin-binding protein 1B
SCNpilot_cont_500_bf_scaffold_20013_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14277..14882
DNA (606bp) protein (202aa)
Penicillin-binding protein 1B n=1 Tax=Rhodanobacter denitrificans RepID=I4WR29_9GAMM
penicillin-binding protein 1B
Penicillin-binding protein 1B {ECO:0000256|PIRNR:PIRNR002799}; Short=PBP-1b {ECO:0000256|PIRNR:PIRNR002799};; Short=PBP1b {ECO:0000256|PIRNR:PIRNR002799};; Murein polymerase {ECO:0000256|PIRNR:PIRNR002799}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_20013_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14891..15415
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4Q5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94446.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_20013_18
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15435..15824)
DNA (390bp) protein (130aa)
Inner membrane protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSB4_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_20013_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15893..16435)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4Q9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94450.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Peroxiredoxin
Displaying 19 items

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