ggKbase home page

SCNpilot_cont_500_bf_scaffold_18386

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_18386_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..535
DNA (534bp) protein (178aa)
ornithine/acetylornithine aminotransferase (EC:2.6.1.36)
Ornithine/acetylornithine aminotransferase {ECO:0000313|EMBL:AGG88216.1}; EC=2.6.1.36 {ECO:0000313|EMBL:AGG88216.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Ornithine/acetylornithine aminotransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NKA9_9GAMM
SCNpilot_cont_500_bf_scaffold_18386_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

690..1037
DNA (348bp) protein (116aa)
PsiF repeat family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEG4_9GAMM
psiF repeat protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_18386_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1139..1780
DNA (642bp) protein (214aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
uracil phosphoribosyltransferase (EC:2.4.2.9) rbh
Uracil phosphoribosyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5E1_9GAMM rbh
SCNpilot_cont_500_bf_scaffold_18386_4
unknown

Not on your lists

comp(2360..2794)
DNA (435bp) protein (145aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_18386_5
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2854..4161
DNA (1308bp) protein (436aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00030A6858 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHX12328.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
nuclease; K07004
SCNpilot_cont_500_bf_scaffold_18386_6
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4158..4481
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00030A6858
Uncharacterized protein {ECO:0000313|EMBL:AHX12328.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SCNpilot_cont_500_bf_scaffold_18386_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4531..5490)
DNA (960bp) protein (320aa)
Proline iminopeptidase {ECO:0000256|RuleBase:RU003421}; EC=3.4.11.5 {ECO:0000256|RuleBase:RU003421};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
prolyl aminopeptidase (EC:3.4.11.5)
Proline iminopeptidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5E0_9GAMM
SCNpilot_cont_500_bf_scaffold_18386_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5553..6398)
DNA (846bp) protein (282aa)
FAD/FMN-dependent dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WNR3_9GAMM
FAD/FMN-dependent dehydrogenase
FAD/FMN-dependent dehydrogenase {ECO:0000313|EMBL:EIL97858.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_cont_500_bf_scaffold_18386_9
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6395..6871)
DNA (477bp) protein (159aa)
FAD/FMN-dependent dehydrogenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEG7_9GAMM
FAD/FMN-dependent dehydrogenase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_18386_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6990..8222
DNA (1233bp) protein (411aa)
phosphoglycerate dehydrogenase-like oxidoreductase (EC:1.1.1.95) rbh
D-3-phosphoglycerate dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5D8_9GAMM rbh
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:EIL94679.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_cont_500_bf_scaffold_18386_trna_1
unknown

Not on your lists

comp(8366..8439)
DNA (74bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_18386_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8501..8857)
DNA (357bp) protein (119aa)
Putative transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5D7_9GAMM
Putative transcriptional regulator {ECO:0000313|EMBL:EIL94678.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative transcriptional regulator
Displaying 12 items

View Taxonomy