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SCNpilot_cont_500_bf_scaffold_18465

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_18465_1
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(132..1166)
DNA (1035bp) protein (345aa)
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y9T4_MESOW
Ribose ABC transport system, periplasmic ribose-binding protein RbsB {ECO:0000313|EMBL:KFC61675.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
periplasmic binding protein/LacI transcriptional regulator; K10552 fructose transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_18465_2
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1367..2398
DNA (1032bp) protein (344aa)
Sugar transcriptional regulator protein, ROK family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LEW4_RHITR
sugar transcriptional regulator protein, ROK family
Sugar transcriptional regulator protein, ROK family {ECO:0000313|EMBL:AGB69953.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_18465_3
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2611..3939
DNA (1329bp) protein (443aa)
Arginase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IBP4_9BRAD
Flagellar basal body P-ring biosynthesis protein FlgA {ECO:0000313|EMBL:KFG68422.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_18465_4
unknown

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comp(3966..4154)
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_18465_5
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4265..5041)
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000372B7FE
Acriflavin resistance protein {ECO:0000313|EMBL:EHK53487.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
acriflavin resistance protein
SCNpilot_cont_500_bf_scaffold_18465_6
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5368..6066
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Pseudomonas putida S11 RepID=J8RTJ2_PSEPU
Uncharacterized protein {ECO:0000313|EMBL:EJT83428.1}; TaxID=1218169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida S11.;"
SCNpilot_cont_500_bf_scaffold_18465_7
unknown

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6187..6357
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_18465_8
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6544..7194)
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000372B7FE
RND efflux transporter
RND efflux transporter {ECO:0000313|EMBL:ADZ71914.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_500_bf_scaffold_18465_9
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7191..8027)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037B5BC2
RND transporter MFP subunit {ECO:0000313|EMBL:ESW82050.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_18465_10
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8528..9043
DNA (516bp) protein (172aa)
Transcriptional regulator n=1 Tax=Phyllobacterium sp. YR531 RepID=J3CFS2_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EJN04879.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
TetR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_18465_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9193..9552
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CLS0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR84005.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
Displaying 11 items

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