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SCNpilot_cont_500_bf_scaffold_4113

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4113_1
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..251
DNA (249bp) protein (83aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20); K01695 tryptophan synthase alpha chain [EC:4.2.1.20]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000380DD6C
SCNpilot_cont_500_bf_scaffold_4113_2
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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280..1176
DNA (897bp) protein (299aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
acetyl-CoA carboxylase carboxyl transferase subunit beta; K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003720166 rbh
SCNpilot_cont_500_bf_scaffold_4113_3
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(980..1672)
DNA (693bp) protein (231aa)
Putative translation initiation factor IF-2 n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RM06_9PROT
Putative translation initiation factor IF-2 {ECO:0000313|EMBL:EFH11667.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
SCNpilot_cont_500_bf_scaffold_4113_4
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1707..2426
DNA (720bp) protein (240aa)
folylpolyglutamate synthetase; K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036C92BF
Folylpolyglutamate synthetase {ECO:0000313|EMBL:BAF87023.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_500_bf_scaffold_4113_5
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2490..2807)
DNA (318bp) protein (106aa)
Thioredoxin n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CEK1_9RHOB
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" source="Roseibium sp. TrichSKD4.;"
Thiol-disulfide isomerase and thioredoxins; K03671 thioredoxin 1
SCNpilot_cont_500_bf_scaffold_4113_6
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2934..6437)
DNA (3504bp) protein (1168aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000360250D rbh
Double-strand break repair helicase AddA rbh
SCNpilot_cont_500_bf_scaffold_4113_7
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6413..9538)
DNA (3126bp) protein (1042aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000362C9B2 rbh
Double-strand break repair protein AddB rbh
Double-strand break repair protein AddB {ECO:0000313|EMBL:ADZ72614.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_500_bf_scaffold_4113_8
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9550..10248)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003766B08
Nucleotidyl transferase superfamily
Nucleotidyl transferase {ECO:0000313|EMBL:EFO32852.1}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" source="Roseibium sp. TrichSKD4.;"
SCNpilot_cont_500_bf_scaffold_4113_9
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10284..10538)
DNA (255bp) protein (85aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y774_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH12376.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein; K07102
Displaying 9 items

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