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SCNpilot_cont_500_bf_scaffold_4160

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4160_1
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..138
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8N8G2_AFIFE
Bradyrhizobium elkanii strain UASWS1015 Contig150, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53119.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
putative nuclease
SCNpilot_cont_500_bf_scaffold_4160_2
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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949..1284
DNA (336bp) protein (112aa)
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=F8BR80_OLICM
Bradyrhizobium elkanii strain UASWS1015 Contig144, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53402.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4160_3
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1428..1919
DNA (492bp) protein (164aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK33_OLICO
Bradyrhizobium elkanii strain UASWS1015 Contig144, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53393.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4160_4
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1944..2648
DNA (705bp) protein (235aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK32_OLICO
Bradyrhizobium elkanii strain UASWS1015 Contig134, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53756.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4160_5
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2817..3599
DNA (783bp) protein (261aa)
UspA domain protein n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X5V4_RHIFR
UspA domain protein {ECO:0000313|EMBL:CDM62358.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
UspA domain-containing protein
SCNpilot_cont_500_bf_scaffold_4160_6
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3669..3914)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NZX5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ETR79416.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4160_7
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3946..4566)
DNA (621bp) protein (207aa)
Autoinducer synthase n=2 Tax=Oligotropha carboxidovorans RepID=B6JK74_OLICO
Bradyrhizobium elkanii strain UASWS1015 Contig144, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53396.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
autoinducer synthase
SCNpilot_cont_500_bf_scaffold_4160_8

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comp(4756..5553)
DNA (798bp) protein (266aa)
Transposase n=1 Tax=uncultured bacterium RepID=E8PRN2_9BACT
Transposase {ECO:0000313|EMBL:ADU90787.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
transposase Tn3 family protein
SCNpilot_cont_500_bf_scaffold_4160_9
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6040..6315
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00037A8C43
Transcriptional repressor FrmR {ECO:0000313|EMBL:CEG09205.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4160_10
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6332..8329
DNA (1998bp) protein (666aa)
Heavy metal translocating P-type ATPase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NH49_AFIFE
Copper-exporting P-type ATPase A {ECO:0000313|EMBL:CEG09206.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
heavy metal translocating p-type atpase rbh
SCNpilot_cont_500_bf_scaffold_4160_11
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8333..8521
DNA (189bp) protein (63aa)
Putative Fe-S protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0D2L8_CAUCE
Putative Fe-S protein {ECO:0000313|EMBL:ENZ82881.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
putative Fe-S protein
SCNpilot_cont_500_bf_scaffold_4160_12

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8536..9405
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI00036DD7A0 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN79089.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative alpha/beta hydrolase superfamily, alr3514-like protein
SCNpilot_cont_500_bf_scaffold_4160_13
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9430..9732)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z4I1_9RHIZ
WGR domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:EIM31123.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
SCNpilot_cont_500_bf_scaffold_4160_14
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9813..10136)
DNA (324bp) protein (108aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=F8BR87_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08331.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
Displaying 14 items

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