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SCNpilot_cont_500_bf_scaffold_4191

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4191_1
unknown

Not on your lists

comp(1..129)
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4191_2
unknown

Not on your lists

comp(565..792)
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4191_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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809..2023
DNA (1215bp) protein (405aa)
Acyltransferase 3 n=2 Tax=Oligotropha carboxidovorans RepID=B6JKC1_OLICO
Membrane protein {ECO:0000313|EMBL:KIZ44799.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
putative transmembrane protein
SCNpilot_cont_500_bf_scaffold_4191_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2519..2929)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFK0_NITHX
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:KIZ44798.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4191_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3475..3864
DNA (390bp) protein (130aa)
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=F8BQZ7_OLICM
Uncharacterized protein {ECO:0000313|EMBL:KIZ44797.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4191_6
unknown

Not on your lists

comp(4904..5176)
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4191_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5671..6225
DNA (555bp) protein (185aa)
Sigma-24 (FecI-like) n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFK5_NITHX rbh
RNA polymerase sigma factor {ECO:0000313|EMBL:KIZ44794.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily rbh
SCNpilot_cont_500_bf_scaffold_4191_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6222..6863
DNA (642bp) protein (214aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JJX0_OLICO
Uncharacterized protein {ECO:0000313|EMBL:KIZ44793.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4191_9
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7162..7461
DNA (300bp) protein (100aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JJX1_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI05252.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_500_bf_scaffold_4191_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7493..7753
DNA (261bp) protein (87aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JJX2_OLICO
Uncharacterized protein {ECO:0000313|EMBL:KIZ44792.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4191_11
unknown

Not on your lists

comp(8564..8743)
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4191_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8776..9360
DNA (585bp) protein (195aa)
Secretion protein HlyD n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFK8_NITHX
Cation transporter {ECO:0000313|EMBL:KIZ44791.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
secretion protein HlyD; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB
Displaying 12 items

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