ggKbase home page

SCNpilot_cont_500_bf_scaffold_4303

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4303_1
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2..1027)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S623_PEDSD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADY52126.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
SCNpilot_cont_500_bf_scaffold_4303_2
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1017..1307)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S622_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY52125.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
SCNpilot_cont_500_bf_scaffold_4303_3
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1304..2200)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S621_PEDSD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADY52124.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
SCNpilot_cont_500_bf_scaffold_4303_4
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2612..2917
DNA (306bp) protein (102aa)
Uncharacterized protein n=3 Tax=Bacteroidetes RepID=F0S619_PEDSD
hypothetical protein
Conjugative transposon protein TraE {ECO:0000313|EMBL:EFK56940.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
SCNpilot_cont_500_bf_scaffold_4303_5
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2929..3261
DNA (333bp) protein (111aa)
Conjugative transposon protein TraF n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VT38_9SPHI
Conjugative transposon protein TraF {ECO:0000313|EMBL:EFK56939.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4303_6
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3258..5762
DNA (2505bp) protein (835aa)
Conjugation system ATPase, TraG family n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VT37_9SPHI rbh
Conjugation system ATPase, TraG family {ECO:0000313|EMBL:EFK56938.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
type IV secretory pathway VirB4 components-like protein rbh
SCNpilot_cont_500_bf_scaffold_4303_7
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5790..6422
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VT36_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:EFK56937.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4303_8
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6425..7420
DNA (996bp) protein (332aa)
Conjugative transposon TraJ protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VT35_9SPHI rbh
Conjugative transposon TraJ protein {ECO:0000313|EMBL:EFK56936.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
TraJ family protein conjugative transposon
SCNpilot_cont_500_bf_scaffold_4303_9
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7446..8069
DNA (624bp) protein (208aa)
Conjugative transposon TraK protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VT34_9SPHI rbh
Conjugative transposon TraK protein {ECO:0000313|EMBL:EFK56935.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4303_10
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8081..8515
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VT33_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EFK56934.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4303_11
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8554..8817
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VT32_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EFK56933.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4303_12
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8804..10144
DNA (1341bp) protein (447aa)
Conjugative transposon TraM protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VT31_9SPHI rbh
Conjugative transposon TraM protein {ECO:0000313|EMBL:EFK56932.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_4303_13
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10169..10861
DNA (693bp) protein (231aa)
Conjugative transposon TraN protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VT30_9SPHI
Conjugative transposon TraN protein {ECO:0000313|EMBL:EFK56931.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
conjugate transposon protein TraN
Displaying 13 items

View Taxonomy