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SCNpilot_cont_500_bf_scaffold_4356

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4356_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..146)
DNA (144bp) protein (48aa)
Pit accessory protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKM0_9GAMM
phosphate transport regulator related to PhoU
Pit accessory protein {ECO:0000313|EMBL:EIL87761.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
SCNpilot_cont_500_bf_scaffold_4356_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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281..1609
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQY3_9GAMM
CBS domain-containing protein
CBS domain-containing protein {ECO:0000313|EMBL:AGG90189.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_4356_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1735..2496)
DNA (762bp) protein (254aa)
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
tRNA/rRNA methyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4V1_9GAMM rbh
RNA methyltransferase, TrmH family, group 1 rbh
SCNpilot_cont_500_bf_scaffold_4356_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2634..3374
DNA (741bp) protein (247aa)
Inositol monophosphatase/fructose-1,6-bisphosphatase family protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQY5_9GAMM
inositol monophosphatase/fructose-1,6-bisphosphatase family protein
Inositol monophosphatase/fructose-1,6-bisphosphatase family protein {ECO:0000313|EMBL:AGG90191.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_4356_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3400..3732)
DNA (333bp) protein (111aa)
Plastocyanin n=1 Tax=Rhodanobacter denitrificans RepID=I4WUU8_9GAMM
plastocyanin
Plastocyanin {ECO:0000313|EMBL:AGG87304.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_4356_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3743..4273)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRG0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89801.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative outer membrane protein
SCNpilot_cont_500_bf_scaffold_4356_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4424..5131
DNA (708bp) protein (236aa)
RNA polymerase sigma factor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRG2_9GAMM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
RNA polymerase sigma factor, sigma-70 family
SCNpilot_cont_500_bf_scaffold_4356_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5139..5846)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4U9_9GAMM rbh
regulatory inactivation of DnaA Hda protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_4356_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5843..7018)
DNA (1176bp) protein (392aa)
Putative permease n=1 Tax=Rhodanobacter denitrificans RepID=M4NKI4_9GAMM rbh
putative permease rbh
Putative permease {ECO:0000313|EMBL:AGG90193.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_4356_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7033..8016)
DNA (984bp) protein (328aa)
Putative secreted protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4U7_9GAMM rbh
Putative secreted protein {ECO:0000313|EMBL:EIL94488.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_4356_11
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8169..9197
DNA (1029bp) protein (343aa)
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1) rbh
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Rhodanobacter denitrificans RepID=M4NGW8_9GAMM rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_4356_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9318..9977
DNA (660bp) protein (220aa)
formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase (EC:2.1.2.2) rbh
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Phosphoribosylformylglycinamidine synthase, clade II n=1 Tax=Rhodanobacter denitrificans RepID=I4WQZ0_9GAMM rbh
SCNpilot_cont_500_bf_scaffold_4356_13
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9977..10726
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4U4_9GAMM
Protein of unknown function (DUF3108)
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_4356_14
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10825..11148)
DNA (324bp) protein (108aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSE6_9GAMM
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
Displaying 14 items

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