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SCNpilot_cont_500_bf_scaffold_4426

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4426_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..939)
DNA (939bp) protein (313aa)
Copper resistance B n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WMA6_9GAMM rbh
Copper resistance B {ECO:0000313|EMBL:EIM00598.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
uncharacterized protein involved in copper resistance
SCNpilot_cont_500_bf_scaffold_4426_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(936..2630)
DNA (1695bp) protein (565aa)
Copper-resistance protein, CopA family n=1 Tax=Rhodanobacter denitrificans RepID=M4NCM1_9GAMM
copper-resistance protein, CopA family
Copper-resistance protein, CopA family {ECO:0000313|EMBL:AGG88440.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_4426_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2734..3081)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WMA4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM00596.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4426_4
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3229..3564)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WMA3_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_4426_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3566..4642
DNA (1077bp) protein (359aa)
Ribosomal RNA large subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_00934}; EC=2.1.1.266 {ECO:0000256|HAMAP-Rule:MF_00934};; 23S rRNA (adenine(2030)-N6)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; 23S rRNA m6A2030 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Ribosomal RNA large subunit methyltransferase J n=1 Tax=Rhodanobacter denitrificans RepID=M4NEQ0_9GAMM
protein involved in catabolism of external DNA
SCNpilot_cont_500_bf_scaffold_4426_6
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4684..5199
DNA (516bp) protein (172aa)
Starvation-inducible outer membrane lipoprotein n=1 Tax=Rhodanobacter denitrificans RepID=M4NL08_9GAMM
starvation-inducible outer membrane lipoprotein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_4426_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5315..6214
DNA (900bp) protein (300aa)
Cation diffusion facilitator family transporter n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WM99_9GAMM rbh
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EIM00591.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
cation diffusion facilitator family transporter rbh
SCNpilot_cont_500_bf_scaffold_4426_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6266..6805
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W619_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94910.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4426_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7126..7728
DNA (603bp) protein (201aa)
Sortase n=1 Tax=Rhodanobacter denitrificans RepID=I4WL91_9GAMM
sortase-like acyltransferase
Sortase-like acyltransferase {ECO:0000313|EMBL:AGG88431.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_4426_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7831..9288
DNA (1458bp) protein (486aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Transcription-repair-coupling factor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W615_9GAMM
transcription-repair coupling factor Mfd
Displaying 10 items

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