ggKbase home page

SCNpilot_cont_500_bf_scaffold_4633

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4633_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..515)
DNA (513bp) protein (171aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IE82_XANP2
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:KFC63731.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
two component transcriptional regulator
SCNpilot_cont_500_bf_scaffold_4633_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

616..2439
DNA (1824bp) protein (608aa)
Cytochrome c biogenesis protein, transmembrane region n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20WQ7_RHOPB
Uncharacterized protein {ECO:0000313|EMBL:KIZ41889.1}; Flags: Fragment;; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
cytochrome c biogenesis protein, transmembrane region
SCNpilot_cont_500_bf_scaffold_4633_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2467..2934
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NV04_AFIFE
DSBA oxidoreductase {ECO:0000313|EMBL:KIZ41890.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4633_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3126..3734
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) RepID=C5ASB3_METEA
Uncharacterized protein {ECO:0000313|EMBL:KIZ41891.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4633_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3768..4253
DNA (486bp) protein (162aa)
Isoprenylcysteine carboxyl methyltransferase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q130T6_RHOPS
isoprenylcysteine carboxyl methyltransferase
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:ABE41403.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCNpilot_cont_500_bf_scaffold_4633_6
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4286..5077
DNA (792bp) protein (264aa)
Tat (Twin-arginine translocation) pathway signal sequence domain protein n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CE00_9RHIZ rbh
Tat (Twin-arginine translocation) pathway signal sequence domain protein {ECO:0000313|EMBL:EIZ81680.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_4633_7
Gluconobacter oxydans, Gluconobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5087..6088
DNA (1002bp) protein (334aa)
Putative sulfate-binding protein n=1 Tax=Gluconobacter oxydans (strain 621H) RepID=Q5HXN2_GLUOX rbh
putative sulfate-binding protein rbh
Putative sulfate-binding protein {ECO:0000313|EMBL:AAW59721.1}; TaxID=290633 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconobacter.;" source="Gluconobacter oxydans (strain 621H) (Gluconobacter suboxydans).;"
SCNpilot_cont_500_bf_scaffold_4633_8
unknown

Not on your lists

comp(6090..6254)
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4633_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6387..7793
DNA (1407bp) protein (469aa)
5'-nucleotidase domain protein (EC:3.1.3.5)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PKL3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42121.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_cont_500_bf_scaffold_4633_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7815..8552
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PHI4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42122.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Cytochrome C class I
SCNpilot_cont_500_bf_scaffold_4633_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8549..9532
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PUQ4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42123.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
cytochrome c, class I
SCNpilot_cont_500_bf_scaffold_4633_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9925..11274
DNA (1350bp) protein (450aa)
Conjugal transfer protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK51_OLICO
Conjugal transfer protein {ECO:0000313|EMBL:KIZ46690.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
virB10; type IV secretion protein VirB10; K03195 type IV secretion system protein VirB10
SCNpilot_cont_500_bf_scaffold_4633_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11237..12295
DNA (1059bp) protein (353aa)
Type II secretion system protein E n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFH6_NITHX
Type VI secretion protein {ECO:0000313|EMBL:KIZ46689.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
type II secretion system protein E; K03196 type IV secretion system protein VirB11
SCNpilot_cont_500_bf_scaffold_4633_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12273..14423
DNA (2151bp) protein (717aa)
TRAG protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFH7_NITHX rbh
Conjugal transfer protein TraG {ECO:0000313|EMBL:KIZ46688.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
TRAG protein; K03205 type IV secretion system protein VirD4 rbh
Displaying 14 items

View Taxonomy