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SCNpilot_cont_500_bf_scaffold_4674

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4674_1
unknown

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comp(1..129)
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4674_2
Ruegeria mobilis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(278..1393)
DNA (1116bp) protein (372aa)
Putative amino acid ABC transporter, substrate-binding protein n=1 Tax=Ruegeria mobilis F1926 RepID=R0DXQ4_9RHOB
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJZ22685.1}; TaxID=379347 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria mobilis.;"
putative amino acid ABC transporter, substrate-binding protein
SCNpilot_cont_500_bf_scaffold_4674_3
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1497..2495)
DNA (999bp) protein (333aa)
Autoinducer 2 import system permease protein lsrC AI-2 import system permease protein lsrC n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AEH4_RHIFH
Sugar ABC transporter permease {ECO:0000313|EMBL:KEC80070.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
rbsc1; Autoinducer 2 import system permease protein lsrC AI-2 import system permease protein lsrC; K10440 ribose transport system permease protein
SCNpilot_cont_500_bf_scaffold_4674_4
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2482..4080)
DNA (1599bp) protein (533aa)
ribose/galactose/methyl galactoside import ATP-binding protein 2 (EC:3.6.3.17)
Sugar ABC transporter ATP-binding protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y725_9RHIZ
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:EHH12484.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
SCNpilot_cont_500_bf_scaffold_4674_5
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4388..5200
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Halomonas lutea RepID=UPI00037EBB5E
Uncharacterized protein {ECO:0000313|EMBL:KGM32656.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4674_6
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5197..6876
DNA (1680bp) protein (560aa)
thiamine pyrophosphate protein; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036EA68A
Thiamine pyrophosphate protein {ECO:0000313|EMBL:ERP88759.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
SCNpilot_cont_500_bf_scaffold_4674_7
Mesorhizobium sp. LSJC277A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7117..7473)
DNA (357bp) protein (119aa)
UPI0003CE72E3 related cluster n=1 Tax=unknown RepID=UPI0003CE72E3
5-carboxymethyl-2-hydroxymuconate isomerase {ECO:0000313|EMBL:ESW68022.1}; TaxID=1287334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC277A00.;"
hpcD; 5-carboxymethyl-2-hydroxymuconate delta isomerase
SCNpilot_cont_500_bf_scaffold_4674_8
Rhodococcus triatomae, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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7557..8534
DNA (978bp) protein (326aa)
serA2; D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95); K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95]
hypothetical protein, partial n=1 Tax=Actinoalloteichus spitiensis RepID=UPI0003782913
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:EME22680.1}; TaxID=1278078 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus triatomae BKS 15-14.;"
SCNpilot_cont_500_bf_scaffold_4674_9
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8579..9532
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RDC8_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ESR24161.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
ABC transporter permease; K07088
SCNpilot_cont_500_bf_scaffold_4674_10
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9619..10149
DNA (531bp) protein (177aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
ppa; inorganic pyrophosphatase (EC:3.6.1.1); K01507 inorganic pyrophosphatase [EC:3.6.1.1]
Inorganic pyrophosphatase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TSI7_9BRAD
SCNpilot_cont_500_bf_scaffold_4674_11
unknown

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10222..10326
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4674_12
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10330..10440
DNA (111bp) protein (37aa)
ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TSX8_9BRAD
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
clpS; ATP-dependent Clp protease adaptor; K06891 ATP-dependent Clp protease adaptor protein ClpS
Displaying 12 items

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