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SCNpilot_cont_500_bf_scaffold_5312

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5312_1
Methylobacterium sp. ME121, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..258)
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=Sphingobium RepID=D4YY50_SPHJU
Uncharacterized protein {ECO:0000313|EMBL:GAN46944.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. ME121.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5312_2
unknown

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comp(355..681)
DNA (327bp) protein (109aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_5312_3
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1047..1934
DNA (888bp) protein (296aa)
Transcriptional regulator n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B113_9RHIZ
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGK57159.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_500_bf_scaffold_5312_4
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1917..2150)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BAK4_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK57160.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_500_bf_scaffold_5312_5
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2161..3342)
DNA (1182bp) protein (394aa)
Conjugation TrbI family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V518_9BRAD
Conjugation TrbI family protein {ECO:0000313|EMBL:EFI53048.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
conjugal transfer protein TrbI
SCNpilot_cont_500_bf_scaffold_5312_6
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3339..4328)
DNA (990bp) protein (330aa)
Putative conjugal transfer protein trbG n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ET13_BRASB
conjugal transfer protein TrbG; K03204 type IV secretion system protein VirB9
Putative conjugal transfer protein trbG {ECO:0000313|EMBL:ABQ39307.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCNpilot_cont_500_bf_scaffold_5312_7
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4328..5008)
DNA (681bp) protein (227aa)
Conjugal transfer protein TrbF n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B2H7_9RHIZ
conjugal transfer protein TrbF
Conjugal transfer protein TrbF {ECO:0000313|EMBL:AGK57163.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_500_bf_scaffold_5312_8
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5011..6273)
DNA (1263bp) protein (421aa)
Conjugal transfer protein TrbL n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B117_9RHIZ
conjugal transfer protein TrbL
Conjugal transfer protein TrbL {ECO:0000313|EMBL:AGK57164.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_500_bf_scaffold_5312_9
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6350..7093)
DNA (744bp) protein (248aa)
Putative conjugal transfer protein trbJ n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ET09_BRASB
Conjugal transfer protein TrbJ {ECO:0000313|EMBL:GAN75810.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
conjugal transfer protein TrbJ
SCNpilot_cont_500_bf_scaffold_5312_10
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7090..7272)
DNA (183bp) protein (61aa)
Conjugal transfer ATPase TrbE n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BH40_9RHIZ
conjugal transfer ATPase TrbE
Conjugal transfer ATPase TrbE {ECO:0000313|EMBL:AGK59761.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
Displaying 10 items

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