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SCNpilot_cont_500_bf_scaffold_5458

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5458_1
unknown

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comp(1..66)
DNA (66bp) protein (22aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_5458_2
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(136..861)
DNA (726bp) protein (242aa)
Putative metal-dependent hydrolase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y784_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:AKH43970.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein; K07043
SCNpilot_cont_500_bf_scaffold_5458_3
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(858..1361)
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI000319EE4E
UPF0260 protein NT2_04_04750 {ECO:0000256|HAMAP-Rule:MF_00676}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
hypothetical protein; K09160 hypothetical protein
SCNpilot_cont_500_bf_scaffold_5458_4
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1349..1960)
DNA (612bp) protein (204aa)
Copper chaperone SCO1/SenC family protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A2T1_9SPHN
SCO1/SenC {ECO:0000313|EMBL:AKH43972.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
electron transport protein; K07152
SCNpilot_cont_500_bf_scaffold_5458_5
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2026..2649
DNA (624bp) protein (208aa)
Ankyrin n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4D5_NOVAD
Ankyrin {ECO:0000313|EMBL:KHL25066.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
ankyrin
SCNpilot_cont_500_bf_scaffold_5458_6
Erythrobacter sp. SD-21, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2660..3343
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PEP8_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EDL47714.1}; TaxID=161528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. SD-21.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5458_7
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3417..3683
DNA (267bp) protein (89aa)
Fe2+ transport system protein A n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PEP9_9SPHN
Iron transporter {ECO:0000313|EMBL:KHK93154.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
hypothetical protein; K04758 ferrous iron transport protein A
SCNpilot_cont_500_bf_scaffold_5458_8
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3680..5533
DNA (1854bp) protein (618aa)
Ferrous iron transport protein B n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YL32_9SPHN rbh
Ferrous iron transport protein B {ECO:0000313|EMBL:GAD49067.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
ferrous iron transport protein B; K04759 ferrous iron transport protein B rbh
SCNpilot_cont_500_bf_scaffold_5458_9
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5630..6151
DNA (522bp) protein (174aa)
Single-stranded DNA-binding protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VZF2_9SPHN
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
single-strand binding protein; K03111 single-strand DNA-binding protein
SCNpilot_cont_500_bf_scaffold_5458_10
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6164..6703)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZUL2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD49069.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5458_11
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6711..7103)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YKI4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD49070.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
hypothetical protein
Displaying 11 items

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