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SCNpilot_cont_500_bf_scaffold_14617

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_14617_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..389
DNA (387bp) protein (129aa)
Membrane protease subunit, stomatin/prohibitin n=1 Tax=Rhodanobacter denitrificans RepID=M4NHI8_9GAMM
membrane protease subunit, stomatin/prohibitin
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_14617_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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591..1160
DNA (570bp) protein (190aa)
Uroporphyrin-III C/tetrapyrrole (Corrin/porphyrin) methyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD79_9GAMM
Uroporphyrin-III C/tetrapyrrole (Corrin/porphyrin) methyltransferase {ECO:0000313|EMBL:EIL97420.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
precorrin-3B methylase
SCNpilot_cont_500_bf_scaffold_14617_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1160..1603
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NHI4_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89542.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_14617_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1653..3311
DNA (1659bp) protein (553aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NPG8_9GAMM rbh
diguanylate cyclase (GGDEF) domain-containing protein rbh
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:AGG89541.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_14617_5
Rheinheimera nanhaiensis, Rheinheimera, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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3509..4045
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Rheinheimera nanhaiensis E407-8 RepID=I1DYX7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAB59255.1}; TaxID=562729 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Rheinheimera.;" source="Rheinheimera nanhaiensis E407-8.;"
SCNpilot_cont_500_bf_scaffold_14617_6
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4050..4316
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NHI4_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_14617_7
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4408..5856
DNA (1449bp) protein (483aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002D5C5B4
diguanylate cyclase (GGDEF) domain-containing protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_14617_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6112..7281
DNA (1170bp) protein (390aa)
Peptidase M28 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD72_9GAMM
Peptidase M28 {ECO:0000313|EMBL:EIL97413.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative aminopeptidase
SCNpilot_cont_500_bf_scaffold_14617_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7227..7703
DNA (477bp) protein (159aa)
Peptidase M28 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD72_9GAMM
Peptidase M28 {ECO:0000313|EMBL:EIL97413.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative aminopeptidase
SCNpilot_cont_500_bf_scaffold_14617_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7956..10412)
DNA (2457bp) protein (819aa)
Putative lipoprotein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD71_9GAMM rbh
Putative lipoprotein {ECO:0000313|EMBL:EIL97412.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Zinc carboxypeptidase rbh
Displaying 10 items

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