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SCNpilot_cont_500_bf_scaffold_7204

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_7204_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..724)
DNA (723bp) protein (241aa)
peptidase S53 propeptide; K05998 pseudomonalisin [EC:3.4.21.100]
Protease n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGQ2_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_7204_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1483..2661
DNA (1179bp) protein (393aa)
Flavoprotein n=1 Tax=Rhodanobacter denitrificans RepID=I4WK39_9GAMM rbh
flavoprotein, HI0933 family/uncharacterized flavoprotein, PP_4765 family
Flavoprotein, HI0933 family/uncharacterized flavoprotein, PP_4765 family {ECO:0000313|EMBL:AGG90771.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_7204_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2674..3441)
DNA (768bp) protein (256aa)
Glutamine cyclotransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W353_9GAMM rbh
Glutamine cyclotransferase {ECO:0000313|EMBL:EIL93894.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
glutamine cyclotransferase rbh
SCNpilot_cont_500_bf_scaffold_7204_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3459..4838)
DNA (1380bp) protein (460aa)
ATP-dependent RNA helicase DbpA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W352_9GAMM
ATP-dependent RNA helicase DbpA {ECO:0000313|EMBL:EIL93893.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA/RNA helicase, superfamily II rbh
SCNpilot_cont_500_bf_scaffold_7204_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4958..5071
DNA (114bp) protein (38aa)
Dihydroneopterin aldolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGP4_9GAMM
dihydroneopterin aldolase
Dihydroneopterin aldolase {ECO:0000313|EMBL:EIL98635.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_cont_500_bf_scaffold_7204_6
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5056..5250
DNA (195bp) protein (65aa)
Dihydroneopterin aldolase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WA52_9GAMM
Dihydroneopterin aldolase {ECO:0000313|EMBL:EIL96343.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
dihydroneopterin aldolase
SCNpilot_cont_500_bf_scaffold_7204_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5386..6642
DNA (1257bp) protein (419aa)
MscS mechanosensitive ion channel n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W350_9GAMM rbh
MscS mechanosensitive ion channel {ECO:0000313|EMBL:EIL93891.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Mechanosensitive ion channel protein MscS; K16053 miniconductance mechanosensitive channel rbh
SCNpilot_cont_500_bf_scaffold_7204_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6647..7135
DNA (489bp) protein (163aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W349_9GAMM
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:EIL93890.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
SCNpilot_cont_500_bf_scaffold_7204_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7220..7768
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W348_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93889.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_7204_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7732..8049
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W348_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93889.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_7204_11
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8088..8837)
DNA (750bp) protein (250aa)
Pteridine reductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WX46_9GAMM rbh
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_7204_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8889..9572)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WX47_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM03297.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_7204_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9743..11359
DNA (1617bp) protein (539aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NAC3_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87410.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_7204_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11356..11844
DNA (489bp) protein (163aa)
Outer membrane receptor protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WV04_9GAMM
Outer membrane receptor protein {ECO:0000313|EMBL:EIM03296.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_7204_15
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11952..13070
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WV03_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_7204_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13072..15297)
DNA (2226bp) protein (742aa)
Phosphoglycerol transferase family protein, alkaline phosphatase superfamily n=1 Tax=Rhodanobacter denitrificans RepID=M4ND94_9GAMM rbh
Phosphoglycerol transferase family protein, alkaline phosphatase superfamily {ECO:0000313|EMBL:AGG87413.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
phosphoglycerol transferase family protein, alkaline phosphatase superfamily rbh
SCNpilot_cont_500_bf_scaffold_7204_17
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15345..16592)
DNA (1248bp) protein (416aa)
Multifunctional CCA protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WV00_9GAMM rbh
tRNA nucleotidyltransferase/poly(A) polymerase rbh
Multifunctional CCA protein {ECO:0000256|HAMAP-Rule:MF_01261, ECO:0000256|SAAS:SAAS00054545}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_cont_500_bf_scaffold_7204_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16655..18022)
DNA (1368bp) protein (456aa)
Glutamate--cysteine ligase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZV6_9GAMM rbh
Glutamate--cysteine ligase {ECO:0000313|EMBL:EIL92747.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
glutamate--cysteine ligase, plant type rbh
SCNpilot_cont_500_bf_scaffold_7204_19
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18278..18367)
DNA (90bp) protein (30aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
Transcription termination factor Rho n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8KZW0_FRAAD
transcription termination factor Rho; K03628 transcription termination factor Rho
Displaying 19 items

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