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SCNpilot_cont_500_bf_scaffold_7527

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_7527_1
Rhodomicrobium vannielii, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(231..908)
DNA (678bp) protein (226aa)
ABC transporter related protein n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I5G7_RHOVT
ABC transporter; K09689 capsular polysaccharide transport system ATP-binding protein
ABC transporter related protein {ECO:0000313|EMBL:ADP71688.1}; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 /; LMG 4299).;"
SCNpilot_cont_500_bf_scaffold_7527_2
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(927..2159)
DNA (1233bp) protein (411aa)
Capsule polysaccharide export protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J2W0P7_9RHIZ
Capsule polysaccharide export protein {ECO:0000313|EMBL:EJN06070.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
capsular polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family
SCNpilot_cont_500_bf_scaffold_7527_3
unknown

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2273..2539
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_7527_4
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2514..3353
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Anaerococcus sp. PH9 RepID=UPI0002F39C83 rbh
Capsular polysaccharide export system inner membrane protein KpsE {ECO:0000313|EMBL:CCW20225.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
capsular polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family
SCNpilot_cont_500_bf_scaffold_7527_5
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3337..4131
DNA (795bp) protein (265aa)
ABC-type polysaccharide/polyol phosphate export system, permease component n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VJ72_9RHIZ
ABC-type polysaccharide/polyol phosphate export system, permease component {ECO:0000313|EMBL:EJN06072.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
capsular polysaccharide export inner-membrane protein; K09688 capsular polysaccharide transport system permease protein
SCNpilot_cont_500_bf_scaffold_7527_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4504..5589
DNA (1086bp) protein (362aa)
Integrase catalytic region n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CXN1_VARPS rbh
integrase catalytic subunit rbh
Integrase catalytic region {ECO:0000313|EMBL:ACS18887.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCNpilot_cont_500_bf_scaffold_7527_7
Gluconobacter oxydans, Gluconobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6555..7982
DNA (1428bp) protein (476aa)
bifunctional protein RfaE; K03272 D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] rbh
Bifunctional protein HldE {ECO:0000255|HAMAP-Rule:MF_01603}; Includes:; D-beta-D-heptose 7-phosphate kinase {ECO:0000255|HAMAP-Rule:MF_01603}; EC=2.7.1.167 {ECO:0000255|HAMAP-Rule:MF_01603};; D-beta-D-heptose 7-phosphotransferase {ECO:0000255|HAMAP-Rule:MF_01603}; D-glycero-beta-D-manno-heptose-7-phosphate kinase {ECO:0000255|HAMAP-Rule:MF_01603}; Includes:; D-beta-D-heptose 1-phosphate adenylyltransferase {ECO:0000255|HAMAP-Rule:MF_01603}; EC=2.7.7.70 {ECO:0000255|HAMAP-Rule:MF_01603};; D-glycero-beta-D-ma
Bifunctional protein HldE n=1 Tax=Gluconobacter oxydans (strain 621H) RepID=HLDE_GLUOX rbh
Displaying 7 items

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