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SCNpilot_cont_500_bf_scaffold_2384

Search features with annotation key words

Displaying 30 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2384_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..380
DNA (378bp) protein (126aa)
Multidrug ABC transporter ATPase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WB42_9GAMM
Multidrug ABC transporter ATPase {ECO:0000313|EMBL:EIL96683.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ABC-type multidrug transport system, ATPase component
SCNpilot_cont_500_bf_scaffold_2384_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

377..1336
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WVC6_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG88655.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_2384_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1371..2060
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNJ0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL88781.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2384_4
unknown

Not on your lists

comp(2142..2240)
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2384_5
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2195..3349)
DNA (1155bp) protein (385aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
fumC; fumarate hydratase; K01679 fumarate hydratase, class II [EC:4.2.1.2]
Fumarate hydratase class II n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3EXW3_STEMA
SCNpilot_cont_500_bf_scaffold_2384_6
unknown

Not on your lists

comp(3621..3953)
DNA (333bp) protein (111aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2384_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4214..4882
DNA (669bp) protein (223aa)
Adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Adenylosuccinate lyase n=1 Tax=Rhodanobacter denitrificans RepID=I4WVD0_9GAMM
SCNpilot_cont_500_bf_scaffold_2384_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4979..6685
DNA (1707bp) protein (569aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXE0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91881.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2384_9
unknown

Not on your lists

6736..6939
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2384_10
Glaciecola pallidula, Glaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6915..7163)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Glaciecola pallidula DSM 14239 = ACAM 615 RepID=K6ZEE2_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:GAC28722.1}; TaxID=1121922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Glaciecola.;" source="Glaciecola pallidula DSM 14239 = ACAM 615.;"
amidohydrolase
SCNpilot_cont_500_bf_scaffold_2384_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7163..8191)
DNA (1029bp) protein (343aa)
amidohydrolase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC4D0
Amidohydrolase {ECO:0000313|EMBL:AHG90871.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
amidohydrolase 3
SCNpilot_cont_500_bf_scaffold_2384_12
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8188..9012)
DNA (825bp) protein (275aa)
amidohydrolase n=1 Tax=Woodsholea maritima RepID=UPI000379ACBE
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:ADK99461.1}; Flags: Precursor;; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;"
SCNpilot_cont_500_bf_scaffold_2384_13
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8963..9553)
DNA (591bp) protein (197aa)
Amidohydrolase family protein n=1 Tax=Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122 RepID=D4SSL9_9XANT
Amidohydrolase {ECO:0000313|EMBL:EYR70018.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
amidohydrolase
SCNpilot_cont_500_bf_scaffold_2384_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9726..9944)
DNA (219bp) protein (73aa)
TonB-dependent receptor, plug n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXD6_9GAMM
TonB-dependent receptor, plug {ECO:0000313|EMBL:EIL91877.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
outer membrane receptor for ferrienterochelin and colicins
SCNpilot_cont_500_bf_scaffold_2384_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9941..12295)
DNA (2355bp) protein (785aa)
TonB-dependent receptor, plug n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXD6_9GAMM rbh
TonB-dependent receptor, plug {ECO:0000313|EMBL:EIL91877.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
outer membrane receptor for ferrienterochelin and colicins rbh
SCNpilot_cont_500_bf_scaffold_2384_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12666..12938
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW29_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91420.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_cont_500_bf_scaffold_2384_17
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13017..16127)
DNA (3111bp) protein (1037aa)
hypothetical protein; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] rbh
Type I restriction-modification deoxyribonuclease, r subunit n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIS3_9GAMM rbh
Type I restriction-modification deoxyribonuclease, r subunit {ECO:0000313|EMBL:EIL99364.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_cont_500_bf_scaffold_2384_18
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16124..16510)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPD2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89073.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2384_19
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16479..17150)
DNA (672bp) protein (224aa)
DNA polymerase subunit beta n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPD1_9GAMM rbh
DNA polymerase subunit beta {ECO:0000313|EMBL:EIL89072.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
DNA polymerase subunit beta
SCNpilot_cont_500_bf_scaffold_2384_20
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17213..18142)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPC9_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL89070.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2384_21
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18429..19772)
DNA (1344bp) protein (448aa)
type I restriction enzyme EcoKI specificity protein; K01154 type I restriction enzyme, S subunit [EC:3.1.21.3] rbh
Type I site-specific deoxyribonuclease n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPC7_9GAMM rbh
Type I site-specific deoxyribonuclease {ECO:0000313|EMBL:EIL89068.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
SCNpilot_cont_500_bf_scaffold_2384_22
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19769..21607)
DNA (1839bp) protein (613aa)
type I restriction-modification methylase m subunit, n-6 DNA methylase (EC:2.1.1.72); K03427 type I restriction enzyme M protein [EC:2.1.1.72] rbh
Site-specific DNA-methyltransferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPC5_9GAMM rbh
Site-specific DNA-methyltransferase {ECO:0000313|EMBL:EIL89066.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
SCNpilot_cont_500_bf_scaffold_2384_23
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21678..22952)
DNA (1275bp) protein (425aa)
HipA protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VRT9_9GAMM rbh
HipA protein {ECO:0000313|EMBL:EIL89930.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
HipA-like protein
SCNpilot_cont_500_bf_scaffold_2384_24
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22949..23197)
DNA (249bp) protein (83aa)
XRE family transcriptional regulator n=1 Tax=Rhodanobacter sp. 115 RepID=I4VRT8_9GAMM
XRE family transcriptional regulator {ECO:0000313|EMBL:EIL89929.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2384_25
unknown

Not on your lists

23284..23541
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2384_26
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23418..24044)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFA6_9GAMM rbh
hypothetical protein rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_2384_trna_1
unknown

Not on your lists

comp(24202..24288)
DNA (87bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_2384_27
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24338..24721)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WA43_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_2384_28
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24718..25998)
DNA (1281bp) protein (427aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
seryl-tRNA synthetase; K01875 seryl-tRNA synthetase [EC:6.1.1.11]
Serine--tRNA ligase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W737_9GAMM rbh
SCNpilot_cont_500_bf_scaffold_2384_29
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26090..26677)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WXB7_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG89278.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 30 items

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