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SCNpilot_cont_500_bf_scaffold_2667

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2667_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..467
DNA (465bp) protein (155aa)
Elongation factor P n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5T4_9GAMM
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
translation elongation factor P
SCNpilot_cont_500_bf_scaffold_2667_2
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

674..2005
DNA (1332bp) protein (444aa)
N-ethylammeline chlorohydrolase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VYH9_9GAMM rbh
N-ethylammeline chlorohydrolase {ECO:0000313|EMBL:EIL92270.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
cytosine deaminase-like metal-dependent hydrolase
SCNpilot_cont_500_bf_scaffold_2667_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2066..2320
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WTL7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM01669.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2667_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2383..3087
DNA (705bp) protein (235aa)
3-demethylubiquinone-9 3-methyltransferase (EC:2.1.1.64)
Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WTL8_9GAMM
Ubiquinone biosynthesis O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472, ECO:0000256|SAAS:SAAS00063564}; 2-polyprenyl-6-hydroxyphenol methylase {ECO:0000256|HAMAP-Rule:MF_00472}; 3-demethylubiquinone 3-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_2667_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3084..3767
DNA (684bp) protein (228aa)
Phosphoglycolate phosphatase {ECO:0000256|SAAS:SAAS00077902}; EC=3.1.3.18 {ECO:0000256|SAAS:SAAS00077902};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Phosphoglycolate phosphatase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5T8_9GAMM
2-phosphoglycolate phosphatase
SCNpilot_cont_500_bf_scaffold_2667_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3867..4538
DNA (672bp) protein (224aa)
Phytoene/squalene synthetase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5T9_9GAMM
Phytoene/squalene synthetase {ECO:0000313|EMBL:EIL94830.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
phytoene/squalene synthetase
SCNpilot_cont_500_bf_scaffold_2667_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4651..5004
DNA (354bp) protein (118aa)
GTP cyclohydrolase FolE2 {ECO:0000256|HAMAP-Rule:MF_01527}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_01527};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase FolE2 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5U0_9GAMM
SCNpilot_cont_500_bf_scaffold_2667_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4986..5579
DNA (594bp) protein (198aa)
GTP cyclohydrolase FolE2 {ECO:0000256|HAMAP-Rule:MF_01527}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_01527};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase FolE2 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5U0_9GAMM
SCNpilot_cont_500_bf_scaffold_2667_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5677..6534)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5U1_9GAMM
Putative membrane protein insertion efficiency factor {ECO:0000256|SAAS:SAAS00100919}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_cont_500_bf_scaffold_2667_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7092..7526)
DNA (435bp) protein (145aa)
SufE protein probably involved in Fe-S center assembly n=1 Tax=Rhodanobacter denitrificans RepID=M4NCI1_9GAMM
SufE protein probably involved in Fe-S center assembly
SufE protein probably involved in Fe-S center assembly {ECO:0000313|EMBL:AGG88354.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_2667_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7582..8178)
DNA (597bp) protein (199aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cysteinyl-tRNA synthetase (EC:6.1.1.16)
cysteinyl-tRNA synthetase n=1 Tax=Dyella ginsengisoli RepID=UPI000361439A
SCNpilot_cont_500_bf_scaffold_2667_12
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8117..8842)
DNA (726bp) protein (242aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WVL2_9GAMM
SCNpilot_cont_500_bf_scaffold_2667_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9094..9618
DNA (525bp) protein (175aa)
Putative outer membrane lipoprotein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5U5_9GAMM
Putative outer membrane lipoprotein {ECO:0000313|EMBL:EIL94836.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative outer membrane lipoprotein
SCNpilot_cont_500_bf_scaffold_2667_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9958..10968
DNA (1011bp) protein (337aa)
ornithine carbamoyltransferase (EC:2.1.3.9) rbh
Ornithine carbamoyltransferase {ECO:0000313|EMBL:AGG88357.1}; EC=2.1.3.9 {ECO:0000313|EMBL:AGG88357.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Ornithine carbamoyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NEI4_9GAMM rbh
SCNpilot_cont_500_bf_scaffold_2667_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11014..11634
DNA (621bp) protein (207aa)
Negative transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQ37_9GAMM rbh
Negative transcriptional regulator {ECO:0000313|EMBL:EIM01579.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_2667_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11631..12104
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQ38_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIM01580.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative redox protein, regulator of disulfide bond formation
SCNpilot_cont_500_bf_scaffold_2667_17
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12133..13326
DNA (1194bp) protein (398aa)
Argininosuccinate synthase {ECO:0000256|SAAS:SAAS00214603}; EC=6.3.4.5 {ECO:0000256|SAAS:SAAS00009947};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQ39_9GAMM rbh
SCNpilot_cont_500_bf_scaffold_2667_18
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13323..14522
DNA (1200bp) protein (400aa)
Acetylornithine deacetylase {ECO:0000313|EMBL:EIM01583.1}; EC=3.5.1.16 {ECO:0000313|EMBL:EIM01583.1};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
acetylornithine deacetylase (EC:3.5.1.16)
Acetylornithine deacetylase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQ41_9GAMM rbh
SCNpilot_cont_500_bf_scaffold_2667_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14509..15828
DNA (1320bp) protein (440aa)
N-acetylglutamate kinase (EC:2.7.2.8) rbh
N-acetylglutamate kinase {ECO:0000313|EMBL:AGG88362.1}; EC=2.7.2.8 {ECO:0000313|EMBL:AGG88362.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
N-acetylglutamate kinase n=1 Tax=Rhodanobacter denitrificans RepID=M4NEJ0_9GAMM rbh
SCNpilot_cont_500_bf_scaffold_2667_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15832..16791
DNA (960bp) protein (320aa)
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38) rbh
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|SAAS:SAAS00137393}; EC=1.2.1.38 {ECO:0000256|SAAS:SAAS00137393};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WTN4_9GAMM rbh
SCNpilot_cont_500_bf_scaffold_2667_21
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16886..18181
DNA (1296bp) protein (432aa)
Argininosuccinate lyase {ECO:0000313|EMBL:EIM01586.1}; EC=4.3.2.1 {ECO:0000313|EMBL:EIM01586.1};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Argininosuccinate lyase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQ44_9GAMM
argininosuccinate lyase
SCNpilot_cont_500_bf_scaffold_2667_22
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18195..19379
DNA (1185bp) protein (395aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Glutamate 5-kinase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQ45_9GAMM rbh
glutamate 5-kinase rbh
SCNpilot_cont_500_bf_scaffold_2667_23
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19376..20638
DNA (1263bp) protein (421aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhoda
glutamate-5-semialdehyde dehydrogenase (EC:1.2.1.41) rbh
Gamma-glutamyl phosphate reductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQ46_9GAMM rbh
SCNpilot_cont_500_bf_scaffold_2667_24
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20617..21606)
DNA (990bp) protein (330aa)
C4-dicarboxylate transporter n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQL1_9GAMM
C4-dicarboxylate transporter {ECO:0000313|EMBL:EIM01753.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
C4-dicarboxylate transporter/malic acid transport protein
SCNpilot_cont_500_bf_scaffold_2667_25
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21686..22660)
DNA (975bp) protein (325aa)
Glutamate carboxypeptidase II n=1 Tax=Rhodanobacter denitrificans RepID=I4WWT1_9GAMM
putative aminopeptidase
Putative aminopeptidase {ECO:0000313|EMBL:AGG89537.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 25 items

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