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SCNpilot_cont_500_bf_scaffold_2842

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2842_1
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(246..458)
DNA (213bp) protein (71aa)
cold-shock protein n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003A51ABE
Cold-shock DNA-binding protein family protein {ECO:0000313|EMBL:EZP51243.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
cold shock protein Y4CH; K03704 cold shock protein (beta-ribbon, CspA family)
SCNpilot_cont_500_bf_scaffold_2842_2
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(804..1655)
DNA (852bp) protein (284aa)
Universal stress protein UspA n=1 Tax=Sphingobium chungbukense RepID=G3KBA9_9SPHN rbh
universal stress protein UspA rbh
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
SCNpilot_cont_500_bf_scaffold_2842_3
alpha proteobacterium JLT2015, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1669..3153)
DNA (1485bp) protein (495aa)
Sulfate permease n=1 Tax=alpha proteobacterium JLT2015 RepID=M2T544_9PROT rbh
Sulfate permease {ECO:0000313|EMBL:EMD81609.1}; TaxID=1234595 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium JLT2015.;"
sulfate transporter rbh
SCNpilot_cont_500_bf_scaffold_2842_4
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3685..4302
DNA (618bp) protein (206aa)
Resolvase domain-containing protein n=2 Tax=Sphingomonadaceae RepID=M4SME4_9SPHN rbh
resolvase domain-containing protein rbh
Resolvase domain-containing protein {ECO:0000313|EMBL:AGH51692.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_cont_500_bf_scaffold_2842_5
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4312..7317
DNA (3006bp) protein (1002aa)
Tn5045 transposase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S7G1_9SPHN rbh
Tn5045 transposase {ECO:0000313|EMBL:AGH51691.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
Tn5045 transposase rbh
SCNpilot_cont_500_bf_scaffold_2842_6
unknown

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7538..8104
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00031532C4
SCNpilot_cont_500_bf_scaffold_2842_7
Providencia stuartii, Providencia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8438..8737
DNA (300bp) protein (100aa)
Uncharacterized protein n=10 Tax=Proteobacteria RepID=G3F9Q2_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIM48375.1}; TaxID=588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Providencia.;" source="Providencia stuartii.;"
SCNpilot_cont_500_bf_scaffold_2842_8
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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8860..10716
DNA (1857bp) protein (619aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCNpilot_cont_500_bf_scaffold_2842_9
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11376..12788
DNA (1413bp) protein (471aa)
dihydropteroate synthase; K00796 dihydropteroate synthase [EC:2.5.1.15] rbh
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=518 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica (Alcaligenes bronchisepticus).;"
Dihydropteroate synthase n=15 Tax=Bacteria RepID=B3VMX3_KLEPN rbh
SCNpilot_cont_500_bf_scaffold_2842_10
Enterobacter sp. 35699, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13252..14712
DNA (1461bp) protein (487aa)
Tn402-like TniA transposase n=1 Tax=Comamonas testosteroni RepID=D3VX10_COMTE
tniA; putative transposase
Transposase {ECO:0000313|EMBL:KJN17081.1}; TaxID=1619248 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 35699.;"
SCNpilot_cont_500_bf_scaffold_2842_11
alpha proteobacterium JLT2015, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14696..17665)
DNA (2970bp) protein (990aa)
TnpA transposase n=2 Tax=Proteobacteria RepID=M2U1V6_9PROT rbh
TnpA transposase {ECO:0000313|EMBL:EMD81793.1}; TaxID=1234595 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium JLT2015.;"
Tn3 family transposase for insertion sequence element
Displaying 11 items

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