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SCNpilot_cont_500_bf_scaffold_2943

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2943_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..478)
DNA (477bp) protein (159aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodan
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6F0_9GAMM
SCNpilot_cont_500_bf_scaffold_2943_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(509..1216)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6E9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95040.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative membrane protein, required for colicin V production
SCNpilot_cont_500_bf_scaffold_2943_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1328..2371)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WLL8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIM02093.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2943_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2448..3011)
DNA (564bp) protein (188aa)
Bifunctional folylpolyglutamate synthase/dihydrofolate synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRK0_9GAMM
Bifunctional folylpolyglutamate synthase/dihydrofolate synthase {ECO:0000313|EMBL:EIM02092.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
folylpolyglutamate synthase/dihydrofolate synthase
SCNpilot_cont_500_bf_scaffold_2943_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3728..4216)
DNA (489bp) protein (163aa)
Heavy metal translocating P-type ATPase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRJ9_9GAMM
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EIM02091.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
copper/silver-translocating P-type ATPase
SCNpilot_cont_500_bf_scaffold_2943_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4216..6174)
DNA (1959bp) protein (653aa)
Heavy metal translocating P-type ATPase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRJ9_9GAMM
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EIM02091.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
copper/silver-translocating P-type ATPase
SCNpilot_cont_500_bf_scaffold_2943_7
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6171..6596)
DNA (426bp) protein (142aa)
Putative transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WLL5_9GAMM
putative transcriptional regulator
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_2943_8
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6715..7377
DNA (663bp) protein (221aa)
Flagellar biosynthetic protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CUI2_SIDLE
flagellar biosynthetic protein
Flagellar biosynthetic protein {ECO:0000313|EMBL:ADE12369.1}; Flags: Precursor;; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotrophicus (strain ES-1).;"
SCNpilot_cont_500_bf_scaffold_2943_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7399..8715)
DNA (1317bp) protein (439aa)
FAD linked oxidase domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WS66_9GAMM
FAD/FMN-dependent dehydrogenase
FAD/FMN-dependent dehydrogenase {ECO:0000313|EMBL:AGG89397.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_2943_10
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9412..10263
DNA (852bp) protein (284aa)
AlgR/AgrA/LytR family regulatory protein RpfD n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLX1_9GAMM
AlgR/AgrA/LytR family regulatory protein RpfD {ECO:0000313|EMBL:EIL88212.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
response regulator of the LytR/AlgR family
SCNpilot_cont_500_bf_scaffold_2943_11
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10417..12498
DNA (2082bp) protein (694aa)
penicillin amidase n=1 Tax=Dyella ginsengisoli RepID=UPI000374DC20 rbh
penicillin acylase rbh
Penicillin acylase {ECO:0000313|EMBL:AER56248.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
SCNpilot_cont_500_bf_scaffold_2943_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12619..14742
DNA (2124bp) protein (708aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W637_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL94928.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
uncharacterized protein involved in outer membrane biogenesis rbh
SCNpilot_cont_500_bf_scaffold_2943_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14796..15581)
DNA (786bp) protein (262aa)
Putative lipoprotein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W636_9GAMM rbh
Putative lipoprotein {ECO:0000313|EMBL:EIL94927.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
lipoprotein
SCNpilot_cont_500_bf_scaffold_2943_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15796..16725
DNA (930bp) protein (310aa)
Integral membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WLB0_9GAMM rbh
Integral membrane protein {ECO:0000313|EMBL:EIM00615.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative permease, DMT superfamily rbh
SCNpilot_cont_500_bf_scaffold_2943_15
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16791..17861
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034946FE rbh
Uncharacterized protein {ECO:0000313|EMBL:KFN42955.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
cnrT; transporter of the DMT superfamily rbh
SCNpilot_cont_500_bf_scaffold_2943_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18075..20060
DNA (1986bp) protein (662aa)
Iron permease FTR1 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP00_9GAMM
Iron permease FTR1 {ECO:0000313|EMBL:EIM01192.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
high-affinity Fe2+/Pb2+ permease
SCNpilot_cont_500_bf_scaffold_2943_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20073..20696
DNA (624bp) protein (208aa)
Co/Zn/Cd efflux system component n=1 Tax=Rhodanobacter denitrificans RepID=M4NMD2_9GAMM rbh
Co/Zn/Cd efflux system component rbh
Co/Zn/Cd efflux system component {ECO:0000313|EMBL:AGG88871.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_2943_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20918..21262
DNA (345bp) protein (115aa)
PAP2 superfamily protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NDM6_9GAMM
PAP2 superfamily protein
PAP2 superfamily protein {ECO:0000313|EMBL:AGG88870.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_2943_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21470..22015)
DNA (546bp) protein (182aa)
Putative cation efflux protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP21_9GAMM
Putative cation efflux protein {ECO:0000313|EMBL:EIM01213.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
cation diffusion facilitator family transporter; K03295 cation efflux system protein, CDF family
SCNpilot_cont_500_bf_scaffold_2943_20
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22286..22837)
DNA (552bp) protein (184aa)
Cation diffusion facilitator n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VT09_9GAMM
Cation diffusion facilitator {ECO:0000313|EMBL:EIL90350.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
czcD1; Co/Zn/Cd efflux system component
SCNpilot_cont_500_bf_scaffold_2943_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22964..23293)
DNA (330bp) protein (110aa)
Nitrogen regulatory protein P-II n=1 Tax=Rhodanobacter denitrificans RepID=I4WWL0_9GAMM
nitrogen regulatory protein PII
Nitrogen regulatory protein PII {ECO:0000313|EMBL:AGG88868.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_2943_22
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23290..23763)
DNA (474bp) protein (158aa)
Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP15_9GAMM
Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA {ECO:0000313|EMBL:EIM01207.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
heavy metal efflux pump, cobalt-zinc-cadmium
SCNpilot_cont_500_bf_scaffold_2943_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23733..26300)
DNA (2568bp) protein (856aa)
Heavy metal efflux pump, cobalt-zinc-cadmium n=1 Tax=Rhodanobacter denitrificans RepID=M4NFN4_9GAMM
heavy metal efflux pump, cobalt-zinc-cadmium
Heavy metal efflux pump, cobalt-zinc-cadmium {ECO:0000313|EMBL:AGG88867.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_2943_24
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26300..27397)
DNA (1098bp) protein (366aa)
Co/Zn/Cd efflux system membrane fusion protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP14_9GAMM rbh
RND family efflux transporter, MFP subunit rbh
Co/Zn/Cd efflux system membrane fusion protein {ECO:0000313|EMBL:EIM01206.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_cont_500_bf_scaffold_2943_25
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27394..28713)
DNA (1320bp) protein (440aa)
Outer membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NDM3_9GAMM rbh
outer membrane protein rbh
Outer membrane protein {ECO:0000313|EMBL:AGG88865.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_2943_26
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28785..29174)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VT03_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90344.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
SCNpilot_cont_500_bf_scaffold_2943_27
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29569..29991)
DNA (423bp) protein (141aa)
Putative mercury transport protein MerC n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNZ7_9GAMM
Putative mercury transport protein MerC {ECO:0000313|EMBL:EIM01189.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative mercury transport protein MerC
SCNpilot_cont_500_bf_scaffold_2943_28
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30062..30160
DNA (99bp) protein (33aa)
Hg(Ii)-responsive transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNZ6_9GAMM
Hg(Ii)-responsive transcriptional regulator {ECO:0000313|EMBL:EIM01188.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Displaying 28 items

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