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SCNpilot_cont_500_bf_scaffold_2990

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2990_1
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..455
DNA (453bp) protein (151aa)
Arsenical-resistance protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JKA0_OLICO
arsB; arsenical-resistance protein; K03325 arsenite transporter, ACR3 family
Arsenite efflux pump protein {ECO:0000313|EMBL:AEI08266.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_500_bf_scaffold_2990_2
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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452..691
DNA (240bp) protein (80aa)
arsC3; arsenate reductase (glutaredoxin) (EC:1.20.4.1); K00537 arsenate reductase [EC:1.20.4.1]
Arsenate reductase ArsC {ECO:0000313|EMBL:AEI08265.1}; EC=1.20.4.1 {ECO:0000313|EMBL:AEI08265.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
Arsenate reductase (Glutaredoxin) n=2 Tax=Oligotropha carboxidovorans RepID=B6JKA1_OLICO
SCNpilot_cont_500_bf_scaffold_2990_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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688..855
DNA (168bp) protein (56aa)
arsenate reductase; K00537 arsenate reductase [EC:1.20.4.1]
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Arsenate reductase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFI4_NITHX
SCNpilot_cont_500_bf_scaffold_2990_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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833..1567
DNA (735bp) protein (245aa)
NADPH-dependent FMN reductase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFI5_NITHX
NADPH-dependent FMN reductase {ECO:0000313|EMBL:KIZ37575.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
NADPH-dependent FMN reductase; K11811 arsenical resistance protein ArsH
SCNpilot_cont_500_bf_scaffold_2990_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2051..2668)
DNA (618bp) protein (206aa)
Cytochrome c, class I n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFP6_NITHX
Cytochrome C {ECO:0000313|EMBL:KIZ37576.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
cytochrome c, class I; K08738 cytochrome c
SCNpilot_cont_500_bf_scaffold_2990_6
unknown

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comp(2665..2799)
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2990_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2811..5909)
DNA (3099bp) protein (1033aa)
Cation efflux system protein cusA n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z6T6_9BRAD
Cation transporter {ECO:0000313|EMBL:KIZ37577.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
CusA; cation efflux system protein cusA
SCNpilot_cont_500_bf_scaffold_2990_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5906..7333)
DNA (1428bp) protein (476aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P018_9BRAD rbh
Cation transporter {ECO:0000313|EMBL:KIZ40088.1}; Flags: Fragment;; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
secretion protein HlyD; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB
SCNpilot_cont_500_bf_scaffold_2990_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7330..7734)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QST9_9BRAD
Conserved exported protein implied in the cusBA heavy metal efflux RND system {ECO:0000313|EMBL:KIZ40087.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2990_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7841..8197)
DNA (357bp) protein (119aa)
Antibiotic transport system permease n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HBQ1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KIZ40086.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
SCNpilot_cont_500_bf_scaffold_2990_11
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8629..9306)
DNA (678bp) protein (226aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QST7_9BRAD rbh
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:EIG62843.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
putative methyltransferase
SCNpilot_cont_500_bf_scaffold_2990_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9420..10061)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. K-62 RepID=I2FG47_9PSED
Uncharacterized protein {ECO:0000313|EMBL:KIZ40085.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2990_13
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10111..10965)
DNA (855bp) protein (285aa)
V8-like Glu-specific endopeptidase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QST6_9BRAD rbh
V8-like Glu-specific endopeptidase {ECO:0000313|EMBL:EIG62842.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
SCNpilot_cont_500_bf_scaffold_2990_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11716..12453)
DNA (738bp) protein (246aa)
Cytochrome c biogenesis protein, transmembrane region n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DSR6_9RHOB rbh
Cytochrome C biogenesis protein {ECO:0000313|EMBL:KIZ40084.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
cytochrome c biogenesis protein transmembrane region; K06196 cytochrome c-type biogenesis protein
SCNpilot_cont_500_bf_scaffold_2990_15
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12485..13279)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F6P6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KIZ40083.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2990_16
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13291..14196)
DNA (906bp) protein (302aa)
Cytochrome oxidase assembly factor n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QST0_9BRAD rbh
Cytochrome oxidase assembly factor {ECO:0000313|EMBL:EIG62836.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
cytochrome c oxidase assembly protein CtaG/Cox11
SCNpilot_cont_500_bf_scaffold_2990_17
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14262..14771)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QSS9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KIZ40082.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein; K09796 hypothetical protein
SCNpilot_cont_500_bf_scaffold_2990_18
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14784..15410)
DNA (627bp) protein (209aa)
Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=U5FCC8_9BRAD
Electron transporter SenC {ECO:0000313|EMBL:KIZ40081.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
senC; SCO2-like protein RP587; K07152
SCNpilot_cont_500_bf_scaffold_2990_19
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(15442..15924)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Halomonas lutea RepID=UPI000377E523
cytochrome c, class I
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
SCNpilot_cont_500_bf_scaffold_2990_20
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15890..16762)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI000380B1E5
Uncharacterized protein {ECO:0000313|EMBL:KIZ40080.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2990_21
unknown

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comp(16759..16872)
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2990_22
unknown

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comp(16844..17086)
DNA (243bp) protein (81aa)

This feature has no annotations

Displaying 22 items

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