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SCNpilot_cont_500_bf_scaffold_31182

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_31182_1
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..326)
DNA (324bp) protein (108aa)
50S ribosomal protein L5 n=3 Tax=Stenotrophomonas maltophilia RepID=I0KJY8_STEMA
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;"
SCNpilot_cont_500_bf_scaffold_31182_2
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(338..655)
DNA (318bp) protein (106aa)
50S ribosomal protein L24 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031D9D08
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24
SCNpilot_cont_500_bf_scaffold_31182_3
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(672..1040)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SZA5_XANCT
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;"
rplN; Ribosomal protein L14
SCNpilot_cont_500_bf_scaffold_31182_4
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1053..1322)
DNA (270bp) protein (90aa)
30S ribosomal protein S17 n=2 Tax=Xanthomonas RepID=UPI0002F4A151
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17
SCNpilot_cont_500_bf_scaffold_31182_5
Xanthomonas vesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1334..1519)
DNA (186bp) protein (62aa)
50S ribosomal protein L29 n=13 Tax=Xanthomonas RepID=RL29_XANC5
rpmC; 50S ribosomal protein L29; K02904 large subunit ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=925775 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vesicatoria ATCC 35937.;"
SCNpilot_cont_500_bf_scaffold_31182_6
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1519..1899)
DNA (381bp) protein (127aa)
50S ribosomal protein L16 n=9 Tax=Stenotrophomonas RepID=RL16_STRMK
50S ribosomal protein L16; K02878 large subunit ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
SCNpilot_cont_500_bf_scaffold_31182_7
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2577..2912)
DNA (336bp) protein (112aa)
50S ribosomal protein L22 n=2 Tax=Pseudoxanthomonas RepID=E6WVG5_PSEUU
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22
SCNpilot_cont_500_bf_scaffold_31182_8
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2925..3194)
DNA (270bp) protein (90aa)
30S ribosomal protein S19 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F82609
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
rpsS; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19
SCNpilot_cont_500_bf_scaffold_31182_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3201..3488)
DNA (288bp) protein (96aa)
50S ribosomal protein L2 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F6E719
Suspect SCG annotation. See neighboring gene [SCNpilot_cont_500_bf_scaffold_31182_10].
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2
SCNpilot_cont_500_bf_scaffold_31182_10
Xanthomonas albilineans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3490..3999)
DNA (510bp) protein (170aa)
50S ribosomal protein L2 n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003A6178B
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=380358 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas albilineans (strain GPE PC73 / CFBP 7063).;"
SCNpilot_cont_500_bf_scaffold_31182_11
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4010..4309)
DNA (300bp) protein (100aa)
50S ribosomal protein L23 n=9 Tax=Stenotrophomonas RepID=RL23_STRM5
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;"
SCNpilot_cont_500_bf_scaffold_31182_12
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4306..4911)
DNA (606bp) protein (202aa)
50S ribosomal protein L4 n=2 Tax=Stenotrophomonas maltophilia RepID=G0JZ44_STEMA rbh
50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 rbh
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
SCNpilot_cont_500_bf_scaffold_31182_13
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4924..5028)
DNA (105bp) protein (35aa)
50S ribosomal protein L3 n=11 Tax=Stenotrophomonas RepID=RL3_STRM5
rplC; 50S ribosomal protein L3; K02906 large subunit ribosomal protein L3
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
Displaying 13 items

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