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SCNpilot_cont_500_bf_scaffold_31969

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_31969_1
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..225)
DNA (225bp) protein (75aa)
50S ribosomal protein L5 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R9S9_LEIAQ
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
50S ribosomal protein L5
SCNpilot_cont_500_bf_scaffold_31969_2
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(225..584)
DNA (360bp) protein (120aa)
50S ribosomal protein L24 n=2 Tax=Leifsonia RepID=U3P8Z8_LEIXC
50S ribosomal protein L24
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
SCNpilot_cont_500_bf_scaffold_31969_3
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(588..956)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TBD2_LEIAQ
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14
SCNpilot_cont_500_bf_scaffold_31969_4
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(953..1261)
DNA (309bp) protein (103aa)
30S ribosomal protein S17 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T3F5_LEIAQ
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
30S ribosomal protein S17
SCNpilot_cont_500_bf_scaffold_31969_5
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(1261..1593)
DNA (333bp) protein (111aa)
Ribosomal protein L29 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RTY4_LEIAQ
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
50S ribosomal protein L29
SCNpilot_cont_500_bf_scaffold_31969_6
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(1593..1853)
DNA (261bp) protein (87aa)
50S ribosomal protein L16 n=2 Tax=Leifsonia RepID=U3P7M4_LEIXC
50S ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
SCNpilot_cont_500_bf_scaffold_31969_7
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(1960..2490)
DNA (531bp) protein (177aa)
30S ribosomal protein S3 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RT93_LEIAQ
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
30S ribosomal protein S3
SCNpilot_cont_500_bf_scaffold_31969_8
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(2599..2991)
DNA (393bp) protein (131aa)
50S ribosomal protein L22 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TBD7_LEIAQ
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22
SCNpilot_cont_500_bf_scaffold_31969_9
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(3017..3298)
DNA (282bp) protein (94aa)
30S ribosomal protein S19 n=2 Tax=Leifsonia PF85_LEIXC">RepID=U3PF85_LEIXC
30S ribosomal protein S19
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_31969_10
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(3311..3475)
DNA (165bp) protein (55aa)
50S ribosomal protein L2 n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3P9W9_LEIXC
Suspect SCG annotation. See neighboring gene [SCNpilot_cont_500_bf_scaffold_31969_11].
50S ribosomal protein L2
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_31969_11
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(3472..3879)
DNA (408bp) protein (136aa)
50S ribosomal protein L2 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RTZ0_LEIAQ
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
50S ribosomal protein L2
SCNpilot_cont_500_bf_scaffold_31969_12
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(4092..4391)
DNA (300bp) protein (100aa)
50S ribosomal protein L23 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R9T5_LEIAQ
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23
SCNpilot_cont_500_bf_scaffold_31969_13
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(4391..5047)
DNA (657bp) protein (219aa)
50S ribosomal protein L4 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RT98_LEIAQ rbh
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 rbh
SCNpilot_cont_500_bf_scaffold_31969_14
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(5052..5558)
DNA (507bp) protein (169aa)
50S ribosomal protein L3 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TBE2_LEIAQ
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
50S ribosomal protein L3
Displaying 14 items

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