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SCNpilot_cont_500_bf_scaffold_35946

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_35946_1
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..616
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003718018
Conjugal transfer protein TraG {ECO:0000313|EMBL:EQB15127.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
traG; Conjugal transfer protein; K03205 type IV secretion system protein VirD4
SCNpilot_cont_500_bf_scaffold_35946_2

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616..1161
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000366E218
Uncharacterized protein {ECO:0000313|EMBL:AGC71256.1}; TaxID=1256589 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_75.;"
CopG family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_35946_3

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1154..1411
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037F07B7
Conjugative transfer protein TrbB {ECO:0000313|EMBL:AGC71255.1}; TaxID=1256589 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_75.;"
P-type conjugative transfer ATPase TrbB; K03196 type IV secretion system protein VirB11
SCNpilot_cont_500_bf_scaffold_35946_4

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1366..2019
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037F07B7
Conjugative transfer protein TrbB {ECO:0000313|EMBL:AGC71255.1}; TaxID=1256589 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_75.;"
conjugal transfer protein traB; K03196 type IV secretion system protein VirB11
SCNpilot_cont_500_bf_scaffold_35946_5

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2022..2477
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003746491
Conjugative transfer protein TrbC {ECO:0000313|EMBL:AGC71254.1}; TaxID=1256589 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_75.;"
trbC; conjugal transfer protein; K03197 type IV secretion system protein VirB2
SCNpilot_cont_500_bf_scaffold_35946_6

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2496..2753
DNA (258bp) protein (86aa)
Conjugative transfer protein TrbD n=1 Tax=uncultured bacterium A1Q1_fos_75 RepID=L7VW30_9BACT
Conjugative transfer protein TrbD {ECO:0000313|EMBL:AGC71253.1}; TaxID=1256589 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_75.;"
Conjugative transfer protein TrbD; K03198 type IV secretion system protein VirB3
Displaying 6 items

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