ggKbase home page

SCNpilot_cont_500_bf_scaffold_16573

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_16573_1
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..216)
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI000373737E
cytochrome c assembly protein; K02198 cytochrome c-type biogenesis protein CcmF
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
SCNpilot_cont_500_bf_scaffold_16573_2
Sphingobium indicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(213..926)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Sphingobium indicum B90A RepID=I5BC75_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EIM67177.1}; TaxID=861109 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium indicum B90A.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_16573_3
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(923..1366)
DNA (444bp) protein (148aa)
Cytochrome c-type biogenesis protein CcmE n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QT76_9RHOB
Cytochrome c-type biogenesis protein CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; Cytochrome c maturation protein E {ECO:0000256|HAMAP-Rule:MF_01959}; Heme chaperone CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia alexandrii (strain DSM 17067 / NCIMB 14079 / DFL-11); (Stappia alexandrii).;"
cytochrome c-type biogenesis protein CcmE; K02197 cytochrome c-type biogenesis protein CcmE
SCNpilot_cont_500_bf_scaffold_16573_4
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1371..2474)
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003741231 rbh
cytochrome C-type biogenesis protein cycH; K02200 cytochrome c-type biogenesis protein CcmH
Cytochrome c-type biogenesis protein CycH {ECO:0000313|EMBL:BAB54099.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_500_bf_scaffold_16573_5
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2542..2928)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035E6E64
17 kDa surface antigen
17 kDa surface antigen {ECO:0000313|EMBL:ADH88058.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_500_bf_scaffold_16573_6
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3006..4370)
DNA (1365bp) protein (455aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000372E38C rbh
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_16573_7
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4360..5034)
DNA (675bp) protein (225aa)
transcriptional regulator n=1 Tax=Kaistia granuli RepID=UPI000375DB06 rbh
Transcriptional regulator {ECO:0000313|EMBL:ERP98871.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
response regulators consisting of a chemotaxis protein CheY domain and a winged-helix DNA-binding domain; K02483 two-component system, OmpR family, response regulator
SCNpilot_cont_500_bf_scaffold_16573_8
unknown

Not on your lists

comp(5053..5361)
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E1E95C
SCNpilot_cont_500_bf_scaffold_16573_9
unknown

Not on your lists

comp(5433..5642)
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_16573_10
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5646..5948)
DNA (303bp) protein (101aa)
Lysozyme n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J654_POLGS
lysozyme
Lysozyme {ECO:0000313|EMBL:ADZ72418.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
Displaying 10 items

View Taxonomy