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SCNpilot_cont_500_bf_scaffold_463

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_463_1
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(319..1008)
DNA (690bp) protein (230aa)
Putative transcriptional regulator with HTH domain n=1 Tax=Caulobacter sp. AP07 RepID=J2PWP5_9CAUL
Putative transcriptional regulator with HTH domain {ECO:0000313|EMBL:EJL32207.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
putative transcriptional regulator
SCNpilot_cont_500_bf_scaffold_463_2
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1072..1758)
DNA (687bp) protein (229aa)
Putative uncharacterized protein n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WNA3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EEQ93858.1}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_463_3
unknown

Not on your lists

comp(1762..1950)
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_463_4
unknown

Not on your lists

2116..2337
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_463_5
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2365..3981
DNA (1617bp) protein (539aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF122 RepID=J2ID02_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJL53915.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
SCNpilot_cont_500_bf_scaffold_463_6
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3983..5290)
DNA (1308bp) protein (436aa)
UBA/ThiF-type NAD/FAD binding fold containing protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BT46_9RHIZ
UBA/ThiF-type NAD/FAD binding fold containing protein {ECO:0000313|EMBL:EIM72748.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
UBA/ThiF-type NAD/FAD binding fold containing protein
SCNpilot_cont_500_bf_scaffold_463_7
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

comp(5287..5805)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI00035F5B66
hypothetical protein
Tax=GWC2_Chloroflexi_49_37_curated
SCNpilot_cont_500_bf_scaffold_463_8
unknown

Not on your lists

comp(6218..6706)
DNA (489bp) protein (163aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_463_9
Frankia sp. CcI3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6878..7174
DNA (297bp) protein (99aa)
Transcriptional regulator, XRE family n=1 Tax=Frankia sp. (strain CcI3) RepID=Q2JGS1_FRASC
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABD09521.1}; TaxID=106370 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;"
SCNpilot_cont_500_bf_scaffold_463_10
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7171..7719
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8B0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95701.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_463_11
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8692..9603
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HU48_PARL1
Scaffold32, whole genome shotgun sequence {ECO:0000313|EMBL:KIS30189.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_463_12
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9642..11333
DNA (1692bp) protein (564aa)
Partitioning protein n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LN71_9PROT
Partitioning protein {ECO:0000313|EMBL:EKF06382.1}; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira profundimaris WP0211.;"
parB-like partition protein; K03497 chromosome partitioning protein, ParB family
SCNpilot_cont_500_bf_scaffold_463_13
unknown

Not on your lists

11449..11592
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_463_14
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11589..12059
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ESY5_BRASB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ39279.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCNpilot_cont_500_bf_scaffold_463_15
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12575..12901
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N7L3_RHOPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAE27685.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
SCNpilot_cont_500_bf_scaffold_463_16
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12980..13267)
DNA (288bp) protein (96aa)
Xre family transcriptional regulator n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J2X2_ACIMA
XRE family transcriptional regulator
Xre family transcriptional regulator {ECO:0000313|EMBL:BAJ79761.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
SCNpilot_cont_500_bf_scaffold_463_17
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13450..13728
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FEV8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX66035.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_463_18
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14090..14623
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B9I0_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK57191.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_500_bf_scaffold_463_19
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14784..15068
DNA (285bp) protein (95aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VQ85_RHOPX
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADU44875.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
SCNpilot_cont_500_bf_scaffold_463_20
Komagataeibacter xylinus, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15079..15639
DNA (561bp) protein (187aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20ZK3_RHOPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHI26374.1}; TaxID=1296990 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter xylinus E25.;"
SCNpilot_cont_500_bf_scaffold_463_21
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15636..16142
DNA (507bp) protein (169aa)
TraF peptidase. Serine peptidase. MEROPS family S26C n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GPU4_SPHAL
TraF peptidase, Serine peptidase, MEROPS family S26C {ECO:0000313|EMBL:EZP68895.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
conjugal transfer protein traF
SCNpilot_cont_500_bf_scaffold_463_22
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16139..16942
DNA (804bp) protein (268aa)
Soluble lytic murein transglycosylase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BHY3_9RHIZ
Lytic transglycosylase, catalytic {ECO:0000313|EMBL:CDN95833.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
soluble lytic murein transglycosylase
SCNpilot_cont_500_bf_scaffold_463_23
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17192..18946
DNA (1755bp) protein (585aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EH08_BRASB
Type VI secretion protein {ECO:0000313|EMBL:KJC40149.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_463_24
unknown

Not on your lists

19086..19442
DNA (357bp) protein (119aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_463_25
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19541..21508
DNA (1968bp) protein (656aa)
Conjugal transfer coupling protein TraG n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BH45_9RHIZ
conjugal transfer coupling protein TraG
Conjugal transfer coupling protein TraG {ECO:0000313|EMBL:AGK59766.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_500_bf_scaffold_463_26
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21513..21938
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ET04_BRASB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ39298.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCNpilot_cont_500_bf_scaffold_463_27
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22075..23130
DNA (1056bp) protein (352aa)
Conjugal transfer protein TrbB n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BAL3_9RHIZ
conjugal transfer protein TrbB
Conjugal transfer protein TrbB {ECO:0000313|EMBL:AGK57170.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_500_bf_scaffold_463_28
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23127..23474
DNA (348bp) protein (116aa)
Conjugal transfer protein TrbC n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B121_9RHIZ
conjugal transfer protein TrbC
Conjugal transfer protein TrbC {ECO:0000313|EMBL:AGK57169.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_500_bf_scaffold_463_29
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23474..23743
DNA (270bp) protein (90aa)
Conjugal transfer protein TrbD n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BBW7_9RHIZ
conjugal transfer protein TrbD
Conjugal transfer protein TrbD {ECO:0000313|EMBL:AGK59762.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_500_bf_scaffold_463_30
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23754..26183
DNA (2430bp) protein (810aa)
Putative conjugal transfer protein trbE n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ET08_BRASB rbh
conjugal transfer ATPase TrbE; K03199 type IV secretion system protein VirB4 rbh
Putative conjugal transfer protein trbE {ECO:0000313|EMBL:ABQ39302.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
Displaying items 1-30 of 64 in total

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