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SCNpilot_cont_500_bf_scaffold_585

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_585_trna_1
unknown

Not on your lists

31..104
DNA (74bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_585_1
Hyphomonas sp. BRH_c22, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(195..3023)
DNA (2829bp) protein (943aa)
Methylase n=1 Tax=Methylobacterium extorquens (strain CM4 / NCIMB 13688) RepID=B7L3F2_METC4 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJS38568.1}; TaxID=1629710 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. BRH_c22.;"
methylase rbh
SCNpilot_cont_500_bf_scaffold_585_2
unknown

Not on your lists

comp(3097..3318)
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_585_3
unknown

Not on your lists

comp(3322..3462)
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_585_4
unknown

Not on your lists

3567..3767
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_585_5
unknown

Not on your lists

comp(3897..4187)
DNA (291bp) protein (97aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_585_6
Paracoccus sp. 5503, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4184..4864)
DNA (681bp) protein (227aa)
Lysozyme {ECO:0000256|RuleBase:RU003788}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; TaxID=1525717 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 5503.;"
muraminidase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D9C9E8
phage related lysozyme
SCNpilot_cont_500_bf_scaffold_585_7
unknown

Not on your lists

comp(4940..5068)
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_585_8
Silicibacter phage DSS3phi2, N4likevirus, Caudovirales, Viruses

Not on your lists

comp(5058..5393)
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=Silicibacter phage DSS3phi2 RepID=C4NT75_9CAUD
Putative uncharacterized protein {ECO:0000313|EMBL:ACL81341.1}; TaxID=490912 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Podoviridae; N4likevirus; unclassified N4likevirus.;" source="Silicibacter phage DSS3phi2.;"
SCNpilot_cont_500_bf_scaffold_585_9
Paracoccus sp. 5503, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5448..6188)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J6G7_POLGS
Ribonuclease III {ECO:0000313|EMBL:KGJ23511.1}; TaxID=1525717 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 5503.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_585_10
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6199..10122)
DNA (3924bp) protein (1308aa)
gene transfer agent (GTA) n=1 Tax=Loktanella vestfoldensis RepID=UPI000364D211
Uncharacterized protein {ECO:0000313|EMBL:AJE46636.1}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter indicus.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_585_11
Rubellimicrobium thermophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10126..10575)
DNA (450bp) protein (150aa)
Putative phage cell wall peptidase, NlpC/P60 family n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9SC48_9RHOB
Putative phage cell wall peptidase, NlpC/P60 family {ECO:0000313|EMBL:EPX87685.1}; TaxID=1123069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium thermophilum DSM 16684.;"
phage cell wall peptidase, NlpC/P60 family
SCNpilot_cont_500_bf_scaffold_585_12
Paracoccus sp. 39524, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10587..11471)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9SMQ1_9RHOB
Beta tubulin, autoregulation binding site {ECO:0000313|EMBL:KGJ16547.1}; TaxID=1525718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 39524.;"
NlpC/P60 family phage cell wall peptidase
SCNpilot_cont_500_bf_scaffold_585_13
Rhizobium phage 16-3, Caudovirales, Viruses

Not on your lists

comp(11496..13106)
DNA (1611bp) protein (537aa)
p023 n=1 Tax=Rhizobium phage 16-3 RepID=B4UTR2_BP163 rbh
p023 {ECO:0000313|EMBL:ABH04446.1}; TaxID=10704 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Rhizobium phage 16-3 (Bacteriophage 16-3).;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_585_14
Pelagibacter phage HTVC008M, Caudovirales, Viruses

Not on your lists

comp(13108..13665)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Pelagibacter phage HTVC008M RepID=M1HLS3_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:AGE60398.1}; TaxID=1283076 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Pelagibacter phage HTVC008M.;"
SCNpilot_cont_500_bf_scaffold_585_15
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13667..15256)
DNA (1590bp) protein (530aa)
Uncharacterized protein {ECO:0000313|EMBL:AIB11784.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
SCNpilot_cont_500_bf_scaffold_585_16
Rubellimicrobium thermophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15270..15917)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9S9M5_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EPX82964.1}; TaxID=1123069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium thermophilum DSM 16684.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_585_17
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15917..18019)
DNA (2103bp) protein (701aa)
Minor tail protein GP26 n=1 Tax=Ruegeria sp. (strain TM1040) RepID=Q1GIG4_RUEST rbh
Potassium ABC transporter ATPase {ECO:0000313|EMBL:EXL08900.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
tape measure domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_585_18
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18009..18200)
DNA (192bp) protein (64aa)
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI0003602F14
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ72205.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_500_bf_scaffold_585_19
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18233..18682)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) RepID=B9KV72_RHOSK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDB05006.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
SCNpilot_cont_500_bf_scaffold_585_20
Brevundimonas sp. BAL3, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18682..19935)
DNA (1254bp) protein (418aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W6S3_9CAUL
Putative uncharacterized protein {ECO:0000313|EMBL:EDX79849.1}; TaxID=391600 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. BAL3.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_585_21
Paenirhodobacter enshiensis, Paenirhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19949..20386)
DNA (438bp) protein (146aa)
Acyl-CoA transferase n=1 Tax=Rhodobacter capsulatus YW2 RepID=V8HR27_RHOCA
Acyl-CoA transferase {ECO:0000313|EMBL:KFI24353.1}; TaxID=1105367 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paenirhodobacter.;" source="Paenirhodobacter enshiensis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_585_22
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20391..21029)
DNA (639bp) protein (213aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SNQ9_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA06082.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_585_23
Paenirhodobacter enshiensis, Paenirhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21026..21340)
DNA (315bp) protein (105aa)
Uncharacterized protein n=4 Tax=Rhodobacter capsulatus RepID=D5AQB0_RHOCB
Uncharacterized protein {ECO:0000313|EMBL:KFI24355.1}; TaxID=1105367 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paenirhodobacter.;" source="Paenirhodobacter enshiensis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_585_24
Ruegeria lacuscaerulensis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21352..21717)
DNA (366bp) protein (122aa)
Putative uncharacterized protein n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CUU7_9RHOB
Putative uncharacterized protein {ECO:0000313|EMBL:EEX09620.1}; TaxID=644107 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Silicibacter lacuscaerulensis ITI-1157.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_585_25
Paenirhodobacter enshiensis, Paenirhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21792..23849)
DNA (2058bp) protein (686aa)
U35 family peptidase (EC:3.4.-.-) rbh
Peptidase U35, phage prohead HK97 n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CUU6_9RHOB rbh
Peptidase U35 {ECO:0000313|EMBL:KFI24357.1}; TaxID=1105367 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paenirhodobacter.;" source="Paenirhodobacter enshiensis.;"
SCNpilot_cont_500_bf_scaffold_585_26
Paracoccus sp. 5503, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23863..25413)
DNA (1551bp) protein (517aa)
Phage portal protein, lambda family n=4 Tax=Rhodobacter capsulatus RepID=D5AQB4_RHOCB rbh
Portal protein {ECO:0000313|EMBL:KGJ23431.1}; TaxID=1525717 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 5503.;"
lambda family phage portal protein rbh
SCNpilot_cont_500_bf_scaffold_585_27
Paenirhodobacter enshiensis, Paenirhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25419..25625)
DNA (207bp) protein (69aa)
Putative uncharacterized protein n=1 Tax=Citreicella sp. SE45 RepID=D0DBM2_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KFI24358.1}; TaxID=1105367 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paenirhodobacter.;" source="Paenirhodobacter enshiensis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_585_28
Paracoccus sp. 5503, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25625..27616)
DNA (1992bp) protein (664aa)
Uncharacterized protein n=1 Tax=Rhodobacter capsulatus YW2 RepID=V8HSA4_RHOCA rbh
Bacteriophage tail assembly protein {ECO:0000313|EMBL:KGJ23433.1}; TaxID=1525717 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 5503.;"
phage terminase large subunit rbh
SCNpilot_cont_500_bf_scaffold_585_29
Haematobacter missouriensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27603..28229)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Rhodobacter capsulatus YW2 RepID=V8HS76_RHOCA
Uncharacterized protein {ECO:0000313|EMBL:KFI32636.1}; TaxID=366616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter missouriensis.;"
hypothetical protein
Displaying items 1-30 of 77 in total

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