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SCNpilot_cont_500_bf_scaffold_790

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_790_1
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..373)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DF58_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO50368.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_cont_500_bf_scaffold_790_2
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(441..1529)
DNA (1089bp) protein (363aa)
Sulfate ABC transporter, periplasmic sulfate-binding protein n=1 Tax=Methylovorus sp. (strain MP688) RepID=E4QKV9_METS6 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIO50367.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
sulfate ABC transporter substrate-binding protein; K02048 sulfate transport system substrate-binding protein rbh
SCNpilot_cont_500_bf_scaffold_790_3
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1726..2454)
DNA (729bp) protein (243aa)
Predicted secretion system X pseudopilin PulG-like n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGF9_9PROT rbh
Predicted secretion system X pseudopilin PulG-like {ECO:0000313|EMBL:CCU61467.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_790_4
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2429..2821)
DNA (393bp) protein (131aa)
Predicted secretion system X protein GspG-like 2 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGS5_9PROT
Type II secretion system protein G {ECO:0000313|EMBL:KIO50366.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
methylation; K02456 general secretion pathway protein G
SCNpilot_cont_500_bf_scaffold_790_5
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2811..3275)
DNA (465bp) protein (155aa)
Predicted secretion system X protein GspG-like n=1 Tax=Nitrosospira sp. APG3 RepID=M5DG75_9PROT
Predicted secretion system X protein GspG-like {ECO:0000313|EMBL:CCU61469.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
methylation; K02456 general secretion pathway protein G
SCNpilot_cont_500_bf_scaffold_790_6
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3272..5206)
DNA (1935bp) protein (645aa)
Predicted secretion system X protein GspD-like n=1 Tax=Nitrosospira sp. APG3 RepID=M5DPT8_9PROT rbh
Type II and III secretion system protein {ECO:0000313|EMBL:KIO50364.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
type II and III secretion system protein; K02453 general secretion pathway protein D rbh
SCNpilot_cont_500_bf_scaffold_790_7
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5206..5781)
DNA (576bp) protein (192aa)
Predicted secretion system X translation initiation factor n=1 Tax=Nitrosospira sp. APG3 RepID=M5DF60_9PROT
Predicted secretion system X translation initiation factor {ECO:0000313|EMBL:CCU61471.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
prolin-rich transmembrane protein
SCNpilot_cont_500_bf_scaffold_790_8
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5805..6353)
DNA (549bp) protein (183aa)
Predicted secretion system X transmembrane protein 2 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGG3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO50363.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_790_9
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6353..6769)
DNA (417bp) protein (139aa)
Predicted secretion system X transmembrane protein 1 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGS8_9PROT
Predicted secretion system X transmembrane protein 1 {ECO:0000313|EMBL:CCU61473.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
fimbrial assembly
SCNpilot_cont_500_bf_scaffold_790_10
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6891..7760)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DG78_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCU61474.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_790_11
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7741..9435)
DNA (1695bp) protein (565aa)
Predicted secretion system X protein GspE-like n=1 Tax=Nitrosospira sp. APG3 RepID=M5DPU2_9PROT rbh
Predicted secretion system X protein GspE-like {ECO:0000313|EMBL:CCU61475.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
type II secretion system protein E; K02454 general secretion pathway protein E rbh
SCNpilot_cont_500_bf_scaffold_790_12
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9432..10613)
DNA (1182bp) protein (394aa)
Predicted secretion system X protein GspF-like n=1 Tax=Nitrosospira sp. APG3 RepID=M5DF61_9PROT rbh
Predicted secretion system X protein GspF-like {ECO:0000313|EMBL:CCU61476.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
type II secretion system protein; K02455 general secretion pathway protein F rbh
SCNpilot_cont_500_bf_scaffold_790_13
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10616..11050)
DNA (435bp) protein (145aa)
Predicted secretion system X protein GspG-like 3 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGG7_9PROT
General secretion pathway protein GspG {ECO:0000313|EMBL:KIO50360.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
general secretion pathway protein G; K02456 general secretion pathway protein G
SCNpilot_cont_500_bf_scaffold_790_14
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11043..11963)
DNA (921bp) protein (307aa)
Alkanesulfonate utilization operon LysR-family regulator CbI n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGT1_9PROT rbh
Alkanesulfonate utilization operon LysR-family regulator CbI {ECO:0000313|EMBL:CCU61478.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
transcriptional regulator CysB-like protein; K13635 LysR family transcriptional regulator, cys regulon transcriptional activator
SCNpilot_cont_500_bf_scaffold_790_15
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12087..12722)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DPU8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO50358.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_790_16
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12781..14313)
DNA (1533bp) protein (511aa)
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid n=1 Tax=Nitrosospira sp. APG3 RepID=M5DF62_9PROT rbh
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid {ECO:0000313|EMBL:CCU61481.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_790_17
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14359..15045)
DNA (687bp) protein (229aa)
Ferric siderophore transport system, periplasmic binding protein TonB n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGH0_9PROT rbh
Ferric siderophore transport system, periplasmic binding protein TonB {ECO:0000313|EMBL:CCU61482.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
TonB-dependent receptor
SCNpilot_cont_500_bf_scaffold_790_18
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15045..15449)
DNA (405bp) protein (135aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGT5_9PROT
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:CCU61483.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
biopolymer transport protein ExbD/TolR; K03559 biopolymer transport protein ExbD
SCNpilot_cont_500_bf_scaffold_790_19
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15449..15859)
DNA (411bp) protein (137aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Nitrosospira sp. APG3 RepID=M5DG85_9PROT
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:CCU61484.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Biopolymer transport protein ExbD/TolR; K03559 biopolymer transport protein ExbD
SCNpilot_cont_500_bf_scaffold_790_20
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15869..17551)
DNA (1683bp) protein (561aa)
MotA/TolQ/ExbB proton channel family protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DPV5_9PROT rbh
Flagellar motor protein MotA {ECO:0000313|EMBL:KIO50355.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
MotA/TolQ/ExbB proton channel; K03561 biopolymer transport protein ExbB rbh
SCNpilot_cont_500_bf_scaffold_790_21
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17594..19426)
DNA (1833bp) protein (611aa)
Hemolysin activation/secretion protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DF63_9PROT rbh
Hemolysin activation/secretion protein {ECO:0000313|EMBL:CCU61486.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hemolysin activation/secretion protein rbh
SCNpilot_cont_500_bf_scaffold_790_22
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19874..20923)
DNA (1050bp) protein (350aa)
Serine O-acetyltransferase (EC:2.3.1.30); K00640 serine O-acetyltransferase [EC:2.3.1.30]
Serine acetyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIV9_9PROT
Serine acetyltransferase {ECO:0000313|EMBL:KIO49932.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_cont_500_bf_scaffold_790_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20945..21373)
DNA (429bp) protein (143aa)
Putative uncharacterized protein (Fragment) id=1371066 bin=GWE1_T_denit_62_9 species=Pseudomonas aeruginosa genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Filamentous haemagglutinin family outer membrane protein associated with VreARI signalling system
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_cont_500_bf_scaffold_790_24
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21312..31349)
DNA (10038bp) protein (3346aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGH5_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:KIO50353.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hemagglutinin-like protein rbh
SCNpilot_cont_500_bf_scaffold_790_25
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31510..32814)
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DG88_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:KIO50352.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_cont_500_bf_scaffold_790_26
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32928..33716)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DPW2_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCU61490.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
SCNpilot_cont_500_bf_scaffold_790_27
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34178..34408
DNA (231bp) protein (77aa)
tRNA 2-thiocytidine biosynthesis protein TtcA n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=TTCA_NITMU
C32 tRNA thiolase; K14058 tRNA 2-thiocytidine biosynthesis protein TtcA
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000255|HAMAP-Rule:MF_01850}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Displaying 27 items

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