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SCNpilot_cont_500_bf_scaffold_867

Search features with annotation key words

Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_867_1
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

238..1509
DNA (1272bp) protein (424aa)
Integrase n=3 Tax=Burkholderia pseudomallei RepID=I2LTC8_BURPE rbh
phage integrase rbh
Putative phage integrase {ECO:0000313|EMBL:CAH36594.1}; TaxID=272560 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei (strain K96243).;"
SCNpilot_cont_500_bf_scaffold_867_2
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1748..4873)
DNA (3126bp) protein (1042aa)
Heavy metal efflux pump CzcA n=1 Tax=Pseudomonas stutzeri ATCC 14405 = CCUG 16156 RepID=H7ERA5_PSEST
czcA; heavy metal efflux pump CzcA; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA
Heavy metal efflux pump CzcA {ECO:0000313|EMBL:EHY76279.1}; TaxID=32042 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri ATCC 14405 = CCUG 16156.;"
SCNpilot_cont_500_bf_scaffold_867_3
Acetobacter aceti, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4870..6336)
DNA (1467bp) protein (489aa)
Cation transporter n=1 Tax=Asaia sp. SF2.1 RepID=V8A3Q9_9PROT
Heavy metal/cation efflux pump CzcB/HlyD {ECO:0000313|EMBL:GAN56555.1}; TaxID=887700 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; Acetobacter subgen. Acetobacter.;" source="Acetobacter aceti NBRC 14818.;"
CzcB family heavy metal RND efflux membrane fusion protein; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB
SCNpilot_cont_500_bf_scaffold_867_4
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6416..6856)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2Q9H5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EIG56431.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_867_5
unknown

Not on your lists

comp(6917..7309)
DNA (393bp) protein (131aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_867_6
unknown

Not on your lists

7357..7890
DNA (534bp) protein (178aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_867_7
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8004..8831
DNA (828bp) protein (276aa)
undecaprenyl pyrophosphate phosphatase (EC:3.6.1.27); K06153 undecaprenyl-diphosphatase [EC:3.6.1.27]
Undecaprenyl-diphosphatase {ECO:0000255|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000255|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000255|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000255|HAMAP-Rule:MF_01006}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002DDFEF0
SCNpilot_cont_500_bf_scaffold_867_8
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8924..9262
DNA (339bp) protein (113aa)
Uncharacterized protein {ECO:0000313|EMBL:KGF71037.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
SCNpilot_cont_500_bf_scaffold_867_9
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9472..11754
DNA (2283bp) protein (761aa)
heavy metal translocating P-type ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]
Heavy metal translocating P-type ATPase n=1 Tax=Methylocystis sp. (strain SC2) RepID=I4EAT9_METSZ rbh
Putative cadmium-transporting ATPase {ECO:0000313|EMBL:GAK33938.1}; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
SCNpilot_cont_500_bf_scaffold_867_10
unknown

Not on your lists

11751..12011
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_867_11
unknown

Not on your lists

12008..12367
DNA (360bp) protein (120aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_867_12
R_Alphaproteobacteria_46_13, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12480..13784
DNA (1305bp) protein (435aa)
Outer membrane efflux protein id=3662336 bin=GWF2_Lentisphaerae_57_35 species=unknown genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
outer membrane efflux family protein; K15725 cobalt-zinc-cadmium resistance protein CzcC
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_46_13_curated
SCNpilot_cont_500_bf_scaffold_867_13
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13781..14740
DNA (960bp) protein (320aa)
RND family efflux transporter MFP subunit n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8HYJ2_9GAMM
RND family efflux transporter MFP subunit
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_cont_500_bf_scaffold_867_14
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14742..15077
DNA (336bp) protein (112aa)
Nitrogen regulatory protein P-II n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MBH1_ACIET
nitrogen regulatory protein p-ii
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:ACM33650.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
SCNpilot_cont_500_bf_scaffold_867_15
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15074..18265
DNA (3192bp) protein (1064aa)
CzcA family heavy metal efflux protein n=1 Tax=Thalassolituus oleivorans MIL-1 RepID=M5DZS2_9GAMM rbh
CzcA family heavy metal efflux protein rbh
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_cont_500_bf_scaffold_867_16
bacterium YEK0313, Bacteria

Not on your lists

18466..19377
DNA (912bp) protein (304aa)
Transcriptional regulator n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KDN8_MESAW
HTH-type transcriptional regulator GltC {ECO:0000313|EMBL:CEJ16015.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_867_17
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19350..19604)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCZ4_PELHB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ52777.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
SCNpilot_cont_500_bf_scaffold_867_18
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19616..20113)
DNA (498bp) protein (166aa)
Conjugation TrbI family protein n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FXW3_PHAMO
Conjugation TrbI family protein {ECO:0000313|EMBL:CCG43201.1}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
conjugation TrbI family protein; K03195 type IV secretion system protein VirB10
SCNpilot_cont_500_bf_scaffold_867_19
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20226..21143
DNA (918bp) protein (306aa)
High-affinity Fe2+/Pb2+ permease (Fragment) n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QSV0_9BRAD
High-affinity Fe2+/Pb2+ permease {ECO:0000313|EMBL:EIG62856.1}; Flags: Fragment;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
iron permease; K07243 high-affinity iron transporter
SCNpilot_cont_500_bf_scaffold_867_20
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21140..21562)
DNA (423bp) protein (141aa)
TRAG family protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJC2_XANP2
conjugal transfer coupling protein TraG; K03205 type IV secretion system protein VirD4
TRAG family protein {ECO:0000313|EMBL:ABS68115.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_500_bf_scaffold_867_21
unknown

Not on your lists

21910..22263
DNA (354bp) protein (118aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_867_22
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22561..22941)
DNA (381bp) protein (127aa)
mercuric reductase n=1 Tax=Sphingobium sp. YL23 RepID=UPI00039A4EF9
Mercuric reductase {ECO:0000313|EMBL:AJR26796.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
mercuric ion transport protein, MerT; K08363 mercuric ion transport protein
SCNpilot_cont_500_bf_scaffold_867_23
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23023..23421
DNA (399bp) protein (133aa)
Putative transcriptional regulator n=1 Tax=Caulobacter sp. AP07 RepID=J2H2A2_9CAUL
Putative transcriptional regulator {ECO:0000313|EMBL:EJL36945.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
transcriptional regulator, MerR family; K08365 MerR family transcriptional regulator, mercuric resistance operon regulatory protein
SCNpilot_cont_500_bf_scaffold_867_24
unknown

Not on your lists

comp(23413..23568)
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_867_25
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23565..25301)
DNA (1737bp) protein (579aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDB1_XANP2
Type VI secretion protein {ECO:0000313|EMBL:KKC25990.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_867_26
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25535..26284)
DNA (750bp) protein (250aa)
Lytic transglycosylase catalytic n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SV59_CAUSK
lytic transglycosylase catalytic subunit
Lytic transglycosylase catalytic {ECO:0000313|EMBL:ABZ72949.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_500_bf_scaffold_867_27
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26287..26799)
DNA (513bp) protein (171aa)
UPI0003CDF62A related cluster n=1 Tax=unknown RepID=UPI0003CDF62A
Peptidase S26 {ECO:0000313|EMBL:ESY71774.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
conjugal transfer protein
SCNpilot_cont_500_bf_scaffold_867_28
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26796..27038)
DNA (243bp) protein (81aa)
C-5 cytosine-specific DNA methylase; K00558 DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37]
Cytosine-specific methyltransferase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B7F1_PARDP
DNA methyltransferase {ECO:0000313|EMBL:KGJ08572.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
SCNpilot_cont_500_bf_scaffold_867_29
unknown

Not on your lists

27681..28091
DNA (411bp) protein (137aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_867_30
unknown

Not on your lists

comp(28073..28270)
DNA (198bp) protein (66aa)

This feature has no annotations

Displaying items 1-30 of 35 in total

View Taxonomy